Pairwise Alignments

Query, 553 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 623 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  247 bits (630), Expect = 1e-69
 Identities = 147/355 (41%), Positives = 211/355 (59%), Gaps = 5/355 (1%)

Query: 199 LYTLAGITLLIVILVSVMAIMINRSIMRPLELFDNSISSFASGDADLTARMEKFSVPEFH 258
           +YT+ G+ L I+ L  ++ ++     M+PL     +I   ASG  DLT R++  +  EF 
Sbjct: 274 IYTVIGVLLSIIGLSFLIKVL-----MKPLGALSRAIEDVASGQGDLTKRLDTNTDMEFA 328

Query: 259 KLSHNFNRFVESLQNIIKRVNQVGQQVVEETNAMSQRATQVDHLASNQREETEQVATAMT 318
            L+ +FN F E+LQ  I+ +  +G +++  T      A +     + Q +E EQ+ATAM 
Sbjct: 329 ILAKDFNVFCETLQKRIQHLKGIGAEIMHGTEQTVLGAHESASAMAQQLQELEQLATAMH 388

Query: 319 EMTTTAQEISNNANNAAQSAKDAEDNATDVHNIVNAAARSVQALAEEVADASSVIAKLEG 378
           EM  TA E++NNA  AA +A +A++ + D   +V+   RS+ AL+  +  A   +  LE 
Sbjct: 389 EMAVTATEVANNAQGAAAAAHEADEASQDGSKVVSDTTRSIDALSARIEQAVEEVKGLEV 448

Query: 379 DVNNITSSLAVIQDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLASRTQESTQQ 438
              NI + L VI DIA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ+ST +
Sbjct: 449 ATGNIETILKVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTE 508

Query: 439 IHTMIQQLKAGSDAAVKAMESSQQRSITTVREANAAAEALQKIQASIGTIMDMNALIATA 498
           I  MI+QL++G+ A   AM  S+  +   V++A  A E+LQ+I+ +I  I DMN  IA+A
Sbjct: 509 IRNMIEQLQSGASAVSAAMNESKYTADDAVQKAQLANESLQRIRGAIQRISDMNMQIASA 568

Query: 499 TEEQSIVGQEISQRIVVISDQSSESADLANQNRQGSQTLNGRAHELYELVARFKV 553
            EEQS+V +EI+   V I D S++ AD A       +       E  +L+  F V
Sbjct: 569 AEEQSLVAEEINTNTVKIKDLSTQVADSAKSASMAMEVQTENVREQGKLLNTFIV 623