Pairwise Alignments

Query, 553 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  224 bits (572), Expect = 5e-63
 Identities = 154/480 (32%), Positives = 255/480 (53%), Gaps = 18/480 (3%)

Query: 79  AIAILREIQFGQSGYIFGYDSKGTRLLLGKATNGLGDNFMNMQDTQGNY---LIQDLLKN 135
           A  ++R   +  + Y++  D   T +           +F + +D +GN    LIQD+L++
Sbjct: 73  ATRLMRNNLYKDNEYVYVADENMTFVATPLDPQLHDTSFHDFKDGKGNSVGRLIQDVLRH 132

Query: 136 --AKLNQFTTYYFPKPGEQTPLPKLSYSVYLPQWDLTIGTGFYTDDVDAEIAEMEARAEE 193
              KL ++T  +  K  + +   KLS +   P W   +GTG   ++V+A        +  
Sbjct: 133 QSGKLVEYT--WTQKQADGSIEEKLSIARKTPHWGWVVGTGIGFNEVNARFW-----STA 185

Query: 194 QLEQGLYTLAGITLLIVILVSVMAIMINRSIMRPLELFDNSISSFASGDADLTARMEKFS 253
           Q +  L  +  + +L ++LV++      R I+  +    N + S     A    R E   
Sbjct: 186 QWQLSLCVVIAVAILSLLLVAI------RKILLIIGGEPNEVRSAVQAVAQGRIRREFVI 239

Query: 254 VPEFHKLSHNFNRFVESLQNIIKRVNQVGQQVVEETNAMSQRATQVDHLASNQREETEQV 313
                 +     +   SL +++ ++ Q    +  E      RA  +  L  +Q++ T  +
Sbjct: 240 KAPKESIYGAVQQMSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAELTDSQQQSTAMI 299

Query: 314 ATAMTEMTTTAQEISNNANNAAQSAKDAEDNATDVHNIVNAAARSVQALAEEVADASSVI 373
           ATAMTEM ++A +++++A + A +   A+  +     +++    ++Q LA ++  AS+ +
Sbjct: 300 ATAMTEMASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQLQTASTAV 359

Query: 374 AKLEGDVNNITSSLAVIQDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLASRTQ 433
           A L+ DV NI   L VI DIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA RTQ
Sbjct: 360 ADLDLDVKNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQ 419

Query: 434 ESTQQIHTMIQQLKAGSDAAVKAMESSQQRSITTVREANAAAEALQKIQASIGTIMDMNA 493
            ST++I  MI  L+ GS  A++ ++   Q S ++V+E+  AA AL  I +++ ++  M+ 
Sbjct: 420 TSTKEIQQMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSALESVSSMSH 479

Query: 494 LIATATEEQSIVGQEISQRIVVISDQSSESADLANQNRQGSQTLNGRAHELYELVARFKV 553
            IATA  EQ+ V  +I++RI +I +  S+ + +  ++   +QTL   A EL +  A F+V
Sbjct: 480 QIATAAAEQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARELEQWAAHFEV 539