Pairwise Alignments

Query, 553 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  280 bits (715), Expect = 1e-79
 Identities = 183/555 (32%), Positives = 294/555 (52%), Gaps = 19/555 (3%)

Query: 2   SLTIRQRLYILSLVPLLTIALSMMYFTFSETRLLSQEQMRNTREAMMEMKQAELKSYLQI 61
           S++I +RL+++ +V +  + +  +         L Q +   TR  +     A + +Y Q 
Sbjct: 6   SMSISRRLWLILVVAVAMLVVLGLLMLRQIHGDLYQAKAEKTRHVVQTA--AGVLAYYQG 63

Query: 62  ADTALAPLKARQAPLDDAIAILREIQFGQSGYIFGYDSKGTRLLLGKATNGLGDNFMN-M 120
            + A     +R+A    A+ ++R +++    Y F  +  G ++++  A   L D  ++ +
Sbjct: 64  LEAA--GTLSREAAQQQALQVVRALRYDHDDY-FWINDLGPKMIMHPANPKLDDQDLSAI 120

Query: 121 QDTQGNYLIQDLLKNAKLNQF--TTYYFPKPGEQTPLPKLSYSVYLPQWDLTIGTGFYTD 178
           +D  G  +  +++  A+        Y +PKPG   P+ K SY      W   IG+G Y D
Sbjct: 121 RDPDGFAVFNEMVALARQQDAGPVNYRWPKPGASEPVAKTSYIQLFKPWGWIIGSGVYVD 180

Query: 179 DVDAEIAEMEARAEEQLEQGLYTLAGITLLIVILVSVMAIMINRSIMRPLELFDNSISSF 238
           DV AE A        QL        GI LL+ ++V ++A    RSI RPL+    ++ + 
Sbjct: 181 DVQAEFAR-------QLRDASLVGVGIALLMALVVMLIA----RSIARPLQEAVQAMGNI 229

Query: 239 ASGDADLTARMEKFSVPEFHKLSHNFNRFVESLQNIIKRVNQVGQQVVEETNAMSQRATQ 298
           ASG++DLT R++     E   L  +FNRF   LQ ++ ++      + +    +   A  
Sbjct: 230 ASGESDLTRRLDTHGSDEITHLGEHFNRFNGKLQGVVGQLQGAAHALAQSAGHVGDNAGA 289

Query: 299 VDHLASNQREETEQVATAMTEMTTTAQEISNNANNAAQSAKDAEDNATDVHNIVNAAARS 358
               ++ Q  + +QVATA+ E+T   Q+++  A  AA   + A+   T     ++ +   
Sbjct: 290 AQQRSAQQSLQMDQVATAVNEVTYAVQDVAKTAEQAAGEMRTAQQQVTHGQQAIHGSLAQ 349

Query: 359 VQALAEEVADASSVIAKLEGDVNNITSSLAVIQDIAEQTNLLALNAAIEAARAGEQGRGF 418
           +  L+  + +A  VI  L G    I   L VI+ IAEQTNLLALNAAIEAARAGEQGRGF
Sbjct: 350 IDRLSLTIDEAVQVIRDLAGHSTRIGGVLDVIRSIAEQTNLLALNAAIEAARAGEQGRGF 409

Query: 419 AVVADEVRKLASRTQESTQQIHTMIQQLKAGSDAAVKAMESSQQRSITTVREANAAAEAL 478
           AVVADEVR LA RT +ST +IHTMI+ L++ SDAAVKA+++S + S  TV +A  A  +L
Sbjct: 410 AVVADEVRLLAQRTAQSTAEIHTMIEHLQSQSDAAVKAIDTSSEASRQTVEQAREAGASL 469

Query: 479 QKIQASIGTIMDMNALIATATEEQSIVGQEISQRIVVISDQSSESADLANQNRQGSQTLN 538
             I   +  +  +NA IA+AT +QS V +EI++ ++  +  S ++AD A Q+      L 
Sbjct: 470 DAINQVLNNLTALNASIASATLQQSHVVEEINRNVLDTAGLSQQTADAARQSSDAGVALG 529

Query: 539 GRAHELYELVARFKV 553
             + EL +L+ +F+V
Sbjct: 530 RLSEELEQLLRQFRV 544