Pairwise Alignments

Query, 553 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 642 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Pseudomonas sp. S08-1

 Score =  236 bits (603), Expect = 2e-66
 Identities = 140/372 (37%), Positives = 212/372 (56%), Gaps = 2/372 (0%)

Query: 182 AEIAEMEARAEEQLEQGLYTLAGITLLIVILVSVMAIMINRSIMRPLELFDNSISSFASG 241
           AE+ E +   E +  Q L   A I   + +L   + +++ R ++RP+     ++     G
Sbjct: 273 AELPEQQVYGEAR--QALLVTALIGAGVALLCLGLVVLLARGLVRPIRRVTQALVEIGGG 330

Query: 242 DADLTARMEKFSVPEFHKLSHNFNRFVESLQNIIKRVNQVGQQVVEETNAMSQRATQVDH 301
             DLT R+++    E   L+  FNRF+E  + +I  V     ++ +    +++       
Sbjct: 331 GGDLTRRLDESRADELGDLARGFNRFLEGQRQLIGEVLATSDKLRDSVAQVARVVENTAL 390

Query: 302 LASNQREETEQVATAMTEMTTTAQEISNNANNAAQSAKDAEDNATDVHNIVNAAARSVQA 361
            +  Q++ T+ VATA+ EM  T QEI+ NA +AA+ ++ A D A    + V+ +   +Q 
Sbjct: 391 RSGQQQDMTDLVATAVHEMGLTVQEIARNAGSAAEVSQKARDEAASARSEVSGSIAHIQR 450

Query: 362 LAEEVADASSVIAKLEGDVNNITSSLAVIQDIAEQTNLLALNAAIEAARAGEQGRGFAVV 421
           ++ E+  A+  + +L   V +I   LAVI+ IAEQTNLLALNAAIEAARAGEQGRGFAVV
Sbjct: 451 MSGEIGTAAGAVGELATQVASIDQVLAVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVV 510

Query: 422 ADEVRKLASRTQESTQQIHTMIQQLKAGSDAAVKAMESSQQRSITTVREANAAAEALQKI 481
           ADEVR LASRTQ ST +I  MI +LK G++AAV +M++ QQ + T V  + +   AL+ I
Sbjct: 511 ADEVRTLASRTQNSTDEIQQMILRLKQGAEAAVSSMQAGQQATGTGVEASQSTGRALESI 570

Query: 482 QASIGTIMDMNALIATATEEQSIVGQEISQRIVVISDQSSESADLANQNRQGSQTLNGRA 541
              +  + DMN  +ATATEEQS V +EI++ +  I+D +  +A      R   Q L   A
Sbjct: 571 AGQVERLSDMNHQVATATEEQSSVTEEINRNVQGIADLAHSTASEVASCRDNCQALQDLA 630

Query: 542 HELYELVARFKV 553
             L   V RF++
Sbjct: 631 QALSAQVGRFRL 642