Pairwise Alignments

Query, 553 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., Methyl-accepting chemotaxis protein McpP from Pseudomonas sp. DMC3

 Score =  374 bits (961), Expect = e-108
 Identities = 206/560 (36%), Positives = 342/560 (61%), Gaps = 7/560 (1%)

Query: 1   MSLTIRQRLYILSLVPLLTIALSMMYFTFSETRLLSQEQMRNTREAMMEMKQAELKSYLQ 60
           M L+++ ++  L+++P+L  AL +   T    +  +++++  TRE ++   +A L+SY+ 
Sbjct: 1   MRLSLKAKVLSLAVLPVLLFALVISVTTLFILQEQARKEVEQTRERLLSDAKATLQSYVA 60

Query: 61  IADTALAPLKARQAPLDDA-----IAILREIQFGQSGYIFGYDSKGTRLLLGKATNGLGD 115
           +A T + PL    AP DDA     I +L  I++G+ GY FGYDS+  RL      +G+G 
Sbjct: 61  VAMTTIKPLYDAAAPGDDAARAQAIKLLSGIRYGKDGYFFGYDSETVRLFKANDPDGVGK 120

Query: 116 NFMNMQDTQGNYLIQDLLKNAKLN-QFTTYYFPKPGEQTPL-PKLSYSVYLPQWDLTIGT 173
           +F + +D  G Y+   L+K AK    +  Y  P PG    L PKL Y+ YLP+WD+ +GT
Sbjct: 121 SFKDNRDPNGVYVNLGLVKVAKDGTHYLQYSSPLPGNAKVLVPKLGYTEYLPKWDMAVGT 180

Query: 174 GFYTDDVDAEIAEMEARAEEQLEQGLYTLAGITLLIVILVSVMAIMINRSIMRPLELFDN 233
               D ++A++A++EA+ +E+++  + ++ G+ +L++++++   +++  +I+RPL L   
Sbjct: 181 SVNLDGIEAQVAQVEAQVQERVQGVVLSIVGVAVLVLLVIAAAGMLLANTILRPLTLMKA 240

Query: 234 SISSFASGDADLTARMEKFSVPEFHKLSHNFNRFVESLQNIIKRVNQVGQQVVEETNAMS 293
           ++   A+G+ DLT R+   S  E  +L+ +FNRFV+ +  +++++ ++  Q+      +S
Sbjct: 241 NLDDIAAGEGDLTRRLNITSQDELGELAGSFNRFVDKIHGLVRQITEMTTQLTGLVTQVS 300

Query: 294 QRATQVDHLASNQREETEQVATAMTEMTTTAQEISNNANNAAQSAKDAEDNATDVHNIVN 353
           ++A + D     QR ET+QVATA+ EM+  AQE++ +A NAA +A+  ++       +V 
Sbjct: 301 EQAQRSDQAMERQRHETDQVATAINEMSAAAQEVAKSAQNAAVAAQQTDEEGQSAKRVVA 360

Query: 354 AAARSVQALAEEVADASSVIAKLEGDVNNITSSLAVIQDIAEQTNLLALNAAIEAARAGE 413
            + + + AL +++ ++   +  L+ DV++I   L VI+ IAEQTNLLALNAAIEAARAGE
Sbjct: 361 GSIKQIHALVDDIRNSGVSLDSLQQDVSSIVGVLGVIRSIAEQTNLLALNAAIEAARAGE 420

Query: 414 QGRGFAVVADEVRKLASRTQESTQQIHTMIQQLKAGSDAAVKAMESSQQRSITTVREANA 473
            GRGFAVVADEVR LASRTQ STQ+I  MI +L+AG+  AV+AM  S +    T ++AN 
Sbjct: 421 AGRGFAVVADEVRALASRTQISTQEIQGMIDRLQAGTQQAVEAMRRSSEAGDGTSQQANQ 480

Query: 474 AAEALQKIQASIGTIMDMNALIATATEEQSIVGQEISQRIVVISDQSSESADLANQNRQG 533
           A  +L  +   I TI  MNA IA+A EEQ+ V +EI++ +  I+      AD      Q 
Sbjct: 481 AGASLDAMAQLIATINSMNAQIASAAEEQTAVAEEINRSVHQIAVAVDSVADETQLGAQT 540

Query: 534 SQTLNGRAHELYELVARFKV 553
           S++L      L +LV +F++
Sbjct: 541 SRSLAELGQRLGKLVGQFRI 560