Pairwise Alignments

Query, 553 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., Methyl-accepting chemotaxis protein 4 from Alteromonas macleodii MIT1002

 Score =  258 bits (660), Expect = 3e-73
 Identities = 176/554 (31%), Positives = 286/554 (51%), Gaps = 33/554 (5%)

Query: 13  SLVPLLTIALSMMYFTFSETRLLSQEQMRNTREAMMEMKQAELKSYLQIADTALAPLKAR 72
           SL+  L I ++++   F    LL+   +    EA+ +    E +  +++  T L+   AR
Sbjct: 7   SLIQRLGIIVALITLLFV---LLTAVVLNRHYEALKQKSYDENQHLVEVVHTMLSSFAAR 63

Query: 73  QAPLDDAIA------ILREIQFGQSGYIFGYDSKGTRLLLGKATNGLGDNFMNMQDTQGN 126
              +D+A A       ++ +++  S Y +  D   + ++        G +    +D  G 
Sbjct: 64  -TDVDEATAKQQALEAVKALRYDGSNYFWIQDQTPSMVMHPIKPALDGQDLRTFKDGNGK 122

Query: 127 YLIQDLLKNAKLNQ--FTTYYFPKPGEQTPLPKLSYSVYLPQWDLTIGTGFYTDDVDAEI 184
               ++ +  K     F  Y +P PGE++P  K+SY      W  T+G+G Y  +++ E 
Sbjct: 123 AFFIEMAQKVKSKGEGFVDYVWPLPGEESPTDKISYVKEFKPWGWTVGSGIYLTNLEKEF 182

Query: 185 AEMEARAEEQLEQGLYTLAGITLLIVILVSVMAIMINRSIMRPLELFDNSISSFASGDAD 244
           A +              +A   L+ ++LV V+  +I  SI++P++     +   + G+ D
Sbjct: 183 AHLRN-----------VIAVFCLVSIVLVVVLVYVIGGSIVKPVQEVSERMKDISQGEGD 231

Query: 245 LTARMEKFSVPEFHKLSHNFNRFVE----SLQNIIKRVNQVGQQV-VEETNAMSQRATQV 299
           LT  + +    E  +L+  FN + E    SL  I + +N + QQ  + ET++ +  A   
Sbjct: 232 LTRSLPETGQDEVTRLARYFNEYTEKMRHSLLGIRENINSLTQQAELVETSSKNSNAQ-- 289

Query: 300 DHLASNQREETEQVATAMTEMTTTAQEISNNANNAAQSAKDAEDNATDVHNIVNAAARSV 359
              A  Q E   QVA AM EMTT   E+SNNA++A +S   A  N  +  ++V++    +
Sbjct: 290 ---AQTQNENMLQVAAAMEEMTTQINEVSNNADSAEKSTSSARGNVQNGASVVDSTVNDI 346

Query: 360 QALAEEVADASSVIAKLEGDVNNITSSLAVIQDIAEQTNLLALNAAIEAARAGEQGRGFA 419
           ++L  ++   SS + +L     +I + L VI+ IAEQTNLLALNAAIEAARAGEQGRGFA
Sbjct: 347 RSLTSDIESVSSAVTELAAQTESIGAVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFA 406

Query: 420 VVADEVRKLASRTQESTQQIHTMIQQLKAGSDAAVKAMESSQQRSITTVREANAAAEALQ 479
           VVADEVR LASRT +ST +I  MI++L++ + +AV A++ SQ  S  TV  A  A + LQ
Sbjct: 407 VVADEVRTLASRTGQSTDEIQAMIEKLQSNAKSAVDAVKVSQSASTKTVDNAIQANQNLQ 466

Query: 480 KIQASIGTIMDMNALIATATEEQSIVGQEISQRIVVISDQSSESADLANQNRQGSQTLNG 539
           +    +  I DM++ IA ATE+Q+    E + RI  +S  +  S   A++    SQ L  
Sbjct: 467 EADRLMTEIADMSSEIARATEQQAEAATEANMRINALSGAADSSLRTADELAAASQALRA 526

Query: 540 RAHELYELVARFKV 553
               + ++  RFK+
Sbjct: 527 SCIAIMDIANRFKL 540