Pairwise Alignments

Query, 239 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score =  154 bits (389), Expect = 2e-42
 Identities = 90/222 (40%), Positives = 129/222 (58%), Gaps = 5/222 (2%)

Query: 19  KIKVYSKYGKEIYVCAKNGGTDPDMNLSLRHLITKAKKDQVPAHVIEKALDKASGGAG-E 77
           K K+++K+ +E+ V A+ GG DP  N  LR  + KA    +   +I++A+ + +G A  +
Sbjct: 21  KGKIFTKWIRELTVAARQGGGDPGSNPRLRLALDKALGANMSRDIIDRAVARGAGAADTD 80

Query: 78  DYQPARYEGFGPGGASVIVDCLTDNGNRTYQDVRQCFVKTGAKIGTPGVVAHMFDHQAVF 137
           D     YEG+GPGG +V+V+C+TDN NRT   VR  F K G  +GT G VA++F+ +   
Sbjct: 81  DMVELSYEGYGPGGVAVMVECMTDNRNRTAAAVRHAFSKCGGNLGTDGSVAYLFERKGQI 140

Query: 138 QF-QGDDEEAILEALMMADAEVTDIEHEDGVITVFAPNTEFFKVKTALNEAFPDLTLDVE 196
            F  G DE+A++EA M ADA+   + +EDG I VF     F+ V+ AL  A         
Sbjct: 141 TFAPGTDEDALMEAAMEADADDV-VTNEDGSIDVFTSFAGFYAVRNALEAA--GFKGTDA 197

Query: 197 EITFVPQNRTVVSGEDAEKFQKFLDMLDDCDDVQQVYHNADI 238
           EI  +P     +  + A+K  K LDML+D DDVQ VY NADI
Sbjct: 198 EIVMLPTTSAELDLDGAQKVLKMLDMLEDLDDVQNVYSNADI 239