Pairwise Alignments

Query, 239 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 237 a.a., YebC/PmpR family DNA-binding transcriptional regulator from Variovorax sp. OAS795

 Score =  101 bits (251), Expect = 1e-26
 Identities = 75/237 (31%), Positives = 120/237 (50%), Gaps = 9/237 (3%)

Query: 1   MGRSFEVRKASMAKTQGAKIKVYSKYGKEIYVCAKNGGTDPDMNLSLRHLITKAKKDQVP 60
           MG  ++ +   +A    AK +++ K  KEI V A++G  DP  N  LR ++ +A+K  +P
Sbjct: 1   MGAQWKAKHKDLAAN--AKGRLFGKLAKEIMVAARSGA-DPGSNARLRLVVEQARKVSMP 57

Query: 61  AHVIEKALDKASGGAGE--DYQPARYEGFGPGGASVIVDCLTDNGNRTYQDVRQCFVKTG 118
              +++A+ K +G  GE   ++   YEGF P    V+V+CLTDN NRT  ++R  F K  
Sbjct: 58  KDTLDRAIKKGAGLTGEAVHFEHVIYEGFAPHQVPVMVECLTDNVNRTAPEMRVLFRK-- 115

Query: 119 AKIGTPGVVAHMFDHQAVFQFQGDDEEAILE-ALMMADAEVTDIEHEDGVITVFAPNTEF 177
            ++GT G V+  FDH  + + +    +A  E A + A A+  +   E G        T+ 
Sbjct: 116 GQLGTSGSVSWDFDHVGMIEAEPSRPDADAEVAAIEAGAQDFEPAGESGATVFLTDPTDL 175

Query: 178 FKVKTAL-NEAFPDLTLDVEEITFVPQNRTVVSGEDAEKFQKFLDMLDDCDDVQQVY 233
             V  AL  + F  L+  +      P +   +S E  E+ + FL  +D  DDVQ V+
Sbjct: 176 DLVSRALPAQGFTVLSAKLGYKPKNPVDPASLSAEHLEEVEVFLAAIDANDDVQNVF 232