Pairwise Alignments

Query, 239 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 237 a.a., putative transcriptional regulatory protein from Pseudomonas putida KT2440

 Score =  108 bits (269), Expect = 1e-28
 Identities = 80/239 (33%), Positives = 119/239 (49%), Gaps = 13/239 (5%)

Query: 1   MGRSFEVRKASMAKTQGAKIKVYSKYGKEIYVCAKNGGTDPDMNLSLRHLITKAKKDQVP 60
           MG  ++ +    A    AK K+  K  KEI + AK+G  DPDMN  LR  I +AKK  + 
Sbjct: 1   MGAQWKAKHRETAAN--AKGKIMGKLSKEIQIAAKSGA-DPDMNPRLRLAIVQAKKASMT 57

Query: 61  AHVIEKALDKASGGAGE--DYQPARYEGFGPGGASVIVDCLTDNGNRTYQDVRQCFVKTG 118
              +++A+ K +G  G+   Y    YEGF P    +IV+CLTDN NRT   +R  F K  
Sbjct: 58  RETLDRAIRKGAGLDGDAVQYHAVSYEGFAPHQVPLIVECLTDNINRTVAQIRVLFRK-- 115

Query: 119 AKIGTPGVVAHMFDHQAVFQFQGDDEEAILE-ALMMADAEVTDIEHEDGVITVFAPNTEF 177
            ++G  G VA  F+H  + +      +A  E A + A A+  +   E+G        T+ 
Sbjct: 116 GQLGASGSVAWDFNHVGLIEATPASADADPEMAAIEAGAQDFEEGEEEGSTLFITDTTDL 175

Query: 178 FKVKTALNEAFPDLTLDVEEITFVPQN---RTVVSGEDAEKFQKFLDMLDDCDDVQQVY 233
             V+ AL E     T+   +I + P+N      +S E   + + FL+ +D+ DDVQ VY
Sbjct: 176 DAVQKALPE--HGFTVTAAKIGYTPKNPVSAASLSAEALAEVEAFLEAIDEHDDVQNVY 232