Pairwise Alignments

Query, 239 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 249 a.a., YebC/PmpR family DNA-binding transcriptional regulator from Magnetospirillum magneticum AMB-1

 Score =  116 bits (290), Expect = 5e-31
 Identities = 78/224 (34%), Positives = 119/224 (53%), Gaps = 8/224 (3%)

Query: 19  KIKVYSKYGKEIYVCAKNGGTDPDMNLSLRHLITKAKKDQVPAHVIEKALDKASGGA-GE 77
           + KV++K  +E+ V AK+G  DP  N  LR  I  A+   +    +++A+ + +GG  G 
Sbjct: 21  RAKVFTKLIRELTVSAKSGMPDPAANPRLRAAIVAARAANMSKDTMDRAIKRGAGGEDGT 80

Query: 78  DYQPARYEGFGPGGASVIVDCLTDNGNRTYQDVRQCFVKTGAKIGTPGVVAHMFDHQAVF 137
           +Y+  RYEG+GPG  ++IV+ LTDN NRT  +VR  F K G  +G    V+ MFD     
Sbjct: 81  NYEEVRYEGYGPGSVAIIVEGLTDNRNRTATEVRTAFNKNGGALGETNSVSFMFDRVGAI 140

Query: 138 QFQGD--DEEAILEALMMADAEVTDIEHEDGVITVFAPNTEFFKVKTALNEAFPDLTLDV 195
           ++       EA+ E  + A A+  + + EDG     AP+ +   V+ AL   F   T + 
Sbjct: 141 RYPASAAGAEAMFEGALDAGADNVESD-EDGHEITCAPD-DLGAVRDALEAKFG--TPEY 196

Query: 196 EEITFVPQNRTVVSGED-AEKFQKFLDMLDDCDDVQQVYHNADI 238
             + + PQ    V+ E+ A    K LD L+D DDVQ+V  N +I
Sbjct: 197 ARLDWKPQTTVPVADEETARTLLKLLDTLEDNDDVQRVQANFEI 240