Pairwise Alignments

Query, 239 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., putative transcriptional regulatory protein YebC from Escherichia coli ECRC62

 Score =  167 bits (422), Expect = 2e-46
 Identities = 89/232 (38%), Positives = 136/232 (58%), Gaps = 7/232 (3%)

Query: 8   RKASMAKTQGAKIKVYSKYGKEIYVCAKNGGTDPDMNLSLRHLITKAKKDQVPAHVIEKA 67
           RKA+    +G   K+++K  +E+   AK GG DPD N  LR  I KA  + +    + +A
Sbjct: 13  RKAAQDAKRG---KIFTKIIRELVTAAKLGGGDPDANPRLRAAIDKALSNNMTRDTLNRA 69

Query: 68  LDKASGGAGE-DYQPARYEGFGPGGASVIVDCLTDNGNRTYQDVRQCFVKTGAKIGTPGV 126
           + +  GG  + + +   YEG+GPGG +++++CL+DN NRT  +VR  F K G  +GT G 
Sbjct: 70  IARGVGGDDDANMETIIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKCGGNLGTDGS 129

Query: 127 VAHMFDHQAVFQFQGDDEEAILEALMMADAEVTDIEHEDGVITVFAPNTEFFKVKTALNE 186
           VA++F  + V  F+  DE+ I+EA + A AE   + ++DG I V+    E  KV+ AL  
Sbjct: 130 VAYLFSKKGVISFEKGDEDTIMEAALEAGAEDV-VTYDDGAIDVYTAWEEMGKVRDALEA 188

Query: 187 AFPDLTLDVEEITFVPQNRTVVSGEDAEKFQKFLDMLDDCDDVQQVYHNADI 238
           A   L  D  E++ +P  +  +  E A K  + +DML+DCDDVQ+VYHN +I
Sbjct: 189 A--GLKADSAEVSMIPSTKADMDAETAPKLMRLIDMLEDCDDVQEVYHNGEI 238