Pairwise Alignments

Query, 239 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 238 a.a., putative transcriptional regulatory protein YcdB from Escherichia coli ECRC62

 Score =  191 bits (485), Expect = 1e-53
 Identities = 100/235 (42%), Positives = 140/235 (59%), Gaps = 1/235 (0%)

Query: 1   MGRSFEVRKASMAKTQGAKIKVYSKYGKEIYVCAKNGGTDPDMNLSLRHLITKAKKDQVP 60
           +GR +    A      GA  K+Y+K+G EIY  AK G  DP++N SL+ +I +AK+ QVP
Sbjct: 1   VGRKWANIVAKKTAKDGATSKIYAKFGVEIYAAAKQGEPDPELNTSLKFVIERAKQAQVP 60

Query: 61  AHVIEKALDKASGGAGEDYQPARYEGFGPGGASVIVDCLTDNGNRTYQDVRQCFVKTGAK 120
            HVI+KA+DKA GG  E +   RYEGFGP G+ +I + LT N NRT  +VR  F K G  
Sbjct: 61  KHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMIIAETLTSNVNRTIANVRTIFNKKGGN 120

Query: 121 IGTPGVVAHMFDHQAVFQFQGDDEEAILEALMMADAEVTDIEHEDGVITVFAPNTEFFKV 180
           IG  G V++MFD+  V  F+G D + I E L+ A+ +V D+  E+G I ++   T+  K 
Sbjct: 121 IGAAGSVSYMFDNTGVIVFKGTDPDHIFEILLEAEVDVRDVTEEEGNIVIYTEPTDLHKG 180

Query: 181 KTALNEAFPDLTLDVEEITFVPQNRTVVSGEDAEKFQKFLDMLDDCDDVQQVYHN 235
             AL +A         E+  + Q+   +S ED E F+  +D L+D DDVQ+VYHN
Sbjct: 181 IAAL-KAAGITEFSTTELEMIAQSEVELSPEDLEIFEGLVDALEDDDDVQKVYHN 234