Pairwise Alignments

Query, 239 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  147 bits (371), Expect = 2e-40
 Identities = 84/229 (36%), Positives = 125/229 (54%), Gaps = 10/229 (4%)

Query: 14  KTQGAKIKVYSKYGKEIYVCAKNGGTDPDMNLSLRHLITKAKKDQVPAHVIEKALDKASG 73
           K    + K++SK  +EI V AK G  DP+MN  LR  I  AK   +P   IE+A+ KASG
Sbjct: 16  KQDSVRSKMFSKLAREITVAAKTGMPDPNMNARLRLAIQNAKAQSMPKDNIERAIKKASG 75

Query: 74  GAGEDYQPARYEGFGPGGASVIVDCLTDNGNRTYQDVRQCFVKTGAKIGTPGVVAHMFDH 133
              E+Y   RYEG+GPGG +V+V+ LTDN NRT  +VR  F K G  +G  G V+  FD 
Sbjct: 76  ADSENYDEVRYEGYGPGGVAVVVEALTDNRNRTASNVRSIFTKAGGALGETGSVSFSFDR 135

Query: 134 --QAVFQFQGDDEEAILEALMMADAEVTDIEHEDGVITVFAPNTEFFKVKTALNEAFPDL 191
             +  ++ +  D + ++EA + A A+  D+E  +   T+       F+    +++A   +
Sbjct: 136 VGEITYKAEVGDADKVMEAAIEAGAD--DVESSEDGHTIICG----FEAMNEVSKALEGV 189

Query: 192 TLDVEEITFV--PQNRTVVSGEDAEKFQKFLDMLDDCDDVQQVYHNADI 238
             + E +  +  PQN   V  E A+   K +D L+D DDVQ VY N ++
Sbjct: 190 LGEAESVKAIWKPQNTVPVDEEKAQSLMKLIDNLEDDDDVQNVYSNFEV 238