Pairwise Alignments

Query, 239 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 249 a.a., putative transcriptional regulatory protein YebC from Acinetobacter radioresistens SK82

 Score =  139 bits (351), Expect = 4e-38
 Identities = 90/234 (38%), Positives = 126/234 (53%), Gaps = 11/234 (4%)

Query: 9   KASMAKTQGAKIKVYSKYGKEIYVCAKNGGTDPDMNLSLRHLITKAKKDQVPAHVIEKAL 68
           K   AK   ++ KV++KY +EI   AK GG D   N  LR ++ KA    +    I +A+
Sbjct: 11  KHRKAKQDASRGKVFTKYIREIVTAAKLGGPDAASNPRLRAVVEKALSVNMTRDTINRAI 70

Query: 69  DKASGGA-GEDYQPARYEGFGPGGASVIVDCLTDNGNRTYQDVRQCFVKTGAKIGTPGVV 127
            + +GG   +D +   YEG+G GG +V+V+ +TDN NRT  DVR CF KT   +GT G V
Sbjct: 71  QRGAGGEDNDDLKEITYEGYGTGGVAVLVETMTDNLNRTVPDVRHCFSKTNGNLGTSGSV 130

Query: 128 AHMFDHQAVFQFQGDD---EEAILEALMMADAEVTDIEHEDGVITVFAPNTEFFKVKTAL 184
           A++F  +    F  DD   EE ILE  + A AE  DIE  +  I V      F  V+ AL
Sbjct: 131 AYLFTKRGEISF--DDLSLEEKILEVALEAGAE--DIEISEDEILVITTPESFGDVQDAL 186

Query: 185 NEAFPDLTLDVEEITFVPQNRTVVSGED-AEKFQKFLDMLDDCDDVQQVYHNAD 237
           + A   L  D  E+   P  +  ++  D A++  K +DML+D DDVQ VY N +
Sbjct: 187 SAA--GLKSDNAEVVMSPSTKAEITDIDQAKQIMKMIDMLEDLDDVQNVYTNVE 238