Pairwise Alignments

Query, 270 a.a., ATP synthase subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., ATP synthase F0 sector subunit a from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  224 bits (572), Expect = 1e-63
 Identities = 127/290 (43%), Positives = 184/290 (63%), Gaps = 28/290 (9%)

Query: 1   MAAPGEALTPSSYITHHLTNLSTYKLGLVAEESSFWNVHIDSLFFSVLTGLIFLGVFRAV 60
           MAA G  LTP  YI HHL +L+ +K G + +   F  ++IDS+  S L GL+ + V    
Sbjct: 1   MAAEG-TLTPGEYIRHHLVHLTNHKQGSIVD---FSVINIDSVVVSALLGLLTVFVLWRA 56

Query: 61  ARKATAGVPGKLQCAVEMVVEFVDKNVKDTFHG--RNPLIAPLALTIFCWVFLMNLMDLV 118
           AR ATAGVPG+ Q AVEM+VE VD   K   H      L+APLALT+F W+F+MN MD++
Sbjct: 57  ARVATAGVPGRFQAAVEMLVEMVDSQAKSVIHNAQSRKLVAPLALTVFVWIFMMNFMDMI 116

Query: 119 PIDFLP---YPAQHWLGI-PYLKVVPSADVNITMAMALGVFALMIYYSIKVKGLGGFAKE 174
           P+D +P   + A   +G   YL+VVP+AD++ T+ +++ V  + ++Y+IK+KGLGG+A E
Sbjct: 117 PVDLIPQIWHSAGPAMGFKDYLRVVPTADLSTTLGLSVSVLLMCLFYNIKIKGLGGWAHE 176

Query: 175 LALHPFNH-----WIMI--PFNLLIEVVSLLAKPLSLGMRLFGNMFAGEVVFILCAAM-- 225
           L   PF       W ++    N L++++  +AK +S GMRLFGNMFAGE+VF+L A +  
Sbjct: 177 LVSAPFGTSKNPLWAVLLGIVNFLMQMIEFVAKTVSHGMRLFGNMFAGELVFMLIALLGA 236

Query: 226 -----LPWYLQWMGSL----PWAIFHILVILIQSFVFMMLTIVYMSMAHE 266
                L   L ++G L     W +FHILVI +Q+F+FMML ++Y+  AH+
Sbjct: 237 YATLSLGGGLFFIGHLIAGTVWTLFHILVITLQAFIFMMLALIYLGQAHD 286