Pairwise Alignments

Query, 513 a.a., ATP synthase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 537 a.a., ATP synthase alpha chain (EC 3.6.3.14) from Variovorax sp. SCN45

 Score =  692 bits (1786), Expect = 0.0
 Identities = 357/523 (68%), Positives = 419/523 (80%), Gaps = 14/523 (2%)

Query: 1   MQLNSTEISDLIKQRIESFNVVSEARNEGTIVSVSDGIIRIHGLADVMQGEMIELPGNR- 59
           MQLN  EIS+LIK RIE   V +  RNEGT+VSV+DGI+R+HGL+D MQGEM+E P +  
Sbjct: 1   MQLNPAEISELIKSRIEGLGVSANIRNEGTVVSVTDGIVRVHGLSDAMQGEMLEFPPSAD 60

Query: 60  ----YALALNLERDSVGAVVMGPYADLREGMKVTGTGRILEVPVGPELLGRVVNTLGEPI 115
               + LALNLERDSVGAV++G Y  + EG  V  TGRILEVPVGPEL+GRVVN LG+PI
Sbjct: 61  GTPSFGLALNLERDSVGAVILGEYEHISEGDTVKCTGRILEVPVGPELIGRVVNALGQPI 120

Query: 116 DGKGPIGAKQTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGK 175
           DGKGPI AK T  +E +APGVI RKSVDQP+QTG KSVDSM+P+GRGQRELIIGDRQTGK
Sbjct: 121 DGKGPINAKMTDVIEKVAPGVIARKSVDQPMQTGLKSVDSMVPVGRGQRELIIGDRQTGK 180

Query: 176 TALAIDAIINQKNSGIYSIYVAIGQKASTIANVVRKLEEHGALKNTIVVVASASESAALQ 235
           TA+AIDAIINQK   +  +YVAIGQKAS+I NVVR LE+ GA+  TIVV ASASESAA+Q
Sbjct: 181 TAVAIDAIINQKGQNMTCVYVAIGQKASSIKNVVRALEQAGAMDYTIVVAASASESAAMQ 240

Query: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295
           Y++ YSGC MGEYFRDRG+DALIVYDDLSKQAVAYRQ+SLLLRRPPGREA+PGDVFYLHS
Sbjct: 241 YVSAYSGCTMGEYFRDRGQDALIVYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYLHS 300

Query: 296 RLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355
           RLLERAARVN +YVE FTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL
Sbjct: 301 RLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 360

Query: 356 QTELFNAGVRPAVDPGISVSRVGGAAQTKIVKKLSGGIRTALAAYRELAAFAQFSSDLDE 415
           +T LFNAG+RPA++ GISVSRVG +AQT +VK  SGGIRT LA YRELAAFAQF+SDLDE
Sbjct: 361 ETNLFNAGIRPAINAGISVSRVGSSAQTNLVKNQSGGIRTDLAQYRELAAFAQFASDLDE 420

Query: 416 ATKRQLTHGQKVTELMKQKQYAPMSVFDQALVIFAAERGYLTDVELNKVLDFEAALLSYA 475
           AT++QL  G +VTEL+KQ QY P+ +   +  +FA  +G++ D+++ KVL FE     Y 
Sbjct: 421 ATRKQLDRGARVTELLKQTQYNPLPISLMSATLFAVNKGFMDDIDVKKVLSFEHGFHQYL 480

Query: 476 RAHYAELAAQIDKTGAYND---------EIEAQLKKLVDDFKA 509
           ++ +A L   ++K GA  D         + +  LKK   D +A
Sbjct: 481 KSSHASLLETMEKHGAKWDVKPAKADDSDAKKALKKACQDAEA 523