Pairwise Alignments

Query, 513 a.a., ATP synthase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., flagellum-specific ATP synthase FliI from Magnetospirillum magneticum AMB-1

 Score =  124 bits (312), Expect = 5e-33
 Identities = 107/386 (27%), Positives = 176/386 (45%), Gaps = 36/386 (9%)

Query: 39  IRIHGLADVMQGEMIELPGNRYALALN-----LERDS-----------VGAVVMGPYADL 82
           I+++G    +QG ++E  G +  +++      + RD             G  ++ PY+ +
Sbjct: 18  IQVYGQIAAVQGMLLEAGGVQRTISVGDRCNVVARDGRRVICEVVGFRQGRALLMPYSPI 77

Query: 83  RE-GMKVTGTGRILEVPVGPEL--LGRVVNTLGEPIDGKGPIGAKQTS-PVEVIAPGVID 138
              G+      +  E  V P+   LGRV+N  GEP+DG GP+    T+ PV+   P    
Sbjct: 78  EGIGLGCRTEVQDAEPVVFPDRGWLGRVINGFGEPVDGLGPLPGGDTAYPVKAQPPSAHS 137

Query: 139 RKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGKTALAIDAIINQKNSGIYSIYVAI 198
           R  V   +  G +SV++ +   RGQR  I      GK++L   +++ +  S   S+   I
Sbjct: 138 RSRVSGKIDLGLRSVNAFLTCCRGQRMGIFAGSGVGKSSLM--SMMARNTSADISVLGLI 195

Query: 199 GQKASTIANVVRKLEEHGALKNTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALI 258
           G++       +        +K ++VVV+++ ES  ++  A Y    + E+FRD+G D L 
Sbjct: 196 GERGREAREFIEDDLGPEGMKRSVVVVSTSDESPLMRRQAAYMTLTVAEFFRDQGLDVLC 255

Query: 259 VYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTKGEVK 318
           + D +++ A+A R+ISL    PP  + +   VF    RLLERA             G   
Sbjct: 256 MMDSVTRFAMAQREISLSAGEPPASKGYTPTVFAELPRLLERA-------------GPGV 302

Query: 319 GKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVG 378
           GK GS+T L  +   A D +  +   V  I DG I L   +   G  PA++   SVSR  
Sbjct: 303 GK-GSITGLFTVLVDADDHNEPIADAVRGILDGHIVLDRSIAERGRYPAINILRSVSRTM 361

Query: 379 GAAQTKIVKKLSGGIRTALAAYRELA 404
                +    L    R+ L+ Y ++A
Sbjct: 362 PGCNNQQENDLVRRARSLLSTYEDMA 387