Pairwise Alignments

Query, 513 a.a., ATP synthase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., Flagellum-specific ATP synthase from Azospirillum sp. SherDot2

 Score =  125 bits (314), Expect = 3e-33
 Identities = 101/399 (25%), Positives = 180/399 (45%), Gaps = 21/399 (5%)

Query: 12  IKQRIESFNVVSEARNEGTIVSVSDGIIRIHGLADVMQ--GEMIELPGNRYALALNLERD 69
           I Q I   + + ++   G + +VS  ++ + G+   +   G  I    +R  +   +   
Sbjct: 5   IDQLIRDIDQIPDSSRYGRVTAVSGLMVEVGGIEKELSVGGRCIVETRDRRQVPCEVVGF 64

Query: 70  SVGAVVMGPYADLRE---GMKVTGTGRILEVPVGPELLGRVVNTLGEPIDGKGPIG-AKQ 125
             G  +  P+  L     G +    G    +      LGRVVN LGEP+DGKGP+    Q
Sbjct: 65  RQGRALAMPFGALDGVGLGCRALVAGDQARIFPTDAWLGRVVNALGEPVDGKGPLPKGPQ 124

Query: 126 TSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGKTALAIDAIIN 185
            +P+    P    R  V + +  G +++++ +   RGQR  I      GK+++   +++ 
Sbjct: 125 GTPIRNTPPNAHSRARVGEKLDLGIRAINAFLTCCRGQRMGIFAGSGVGKSSVM--SMLA 182

Query: 186 QKNSGIYSIYVAIGQKASTIANVVRKLEEHGALKNTIVVVASASESAALQYLAPYSGCAM 245
           + ++   ++   IG++   +   + +      L  ++VV A++ E+  ++  A Y   A+
Sbjct: 183 RFSAAEVAVIGLIGERGRELQEFITEDLGEEGLARSVVVCATSDEAPLMRKQAAYMTLAV 242

Query: 246 GEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSRLLERAARVN 305
            E+FRD+G D L + D +++ A+A R+I L    PP  + +P  VF    RLLERA    
Sbjct: 243 AEHFRDQGRDVLCMMDSVTRFAMAQREIGLSAGEPPTTKGYPPTVFAELPRLLERA---- 298

Query: 306 EEYVERFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLQTELFNAGVR 365
                    G      G++T L  +     D +  +   V  I DG I ++ ++   G  
Sbjct: 299 ---------GPGVVGAGTITGLFTVLVDGDDHNEPIADAVRGILDGHIVMERQIGERGRY 349

Query: 366 PAVDPGISVSRVGGAAQTKIVKKLSGGIRTALAAYRELA 404
           PA++   SVSR      T    +L G  R  L++Y  +A
Sbjct: 350 PAINILRSVSRTMPGCNTANENELVGHARRLLSSYDNMA 388