Pairwise Alignments

Query, 288 a.a., ATP synthase subunit gamma from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., ATP synthase gamma chain from Azospirillum sp. SherDot2

 Score =  153 bits (387), Expect = 4e-42
 Identities = 102/300 (34%), Positives = 167/300 (55%), Gaps = 18/300 (6%)

Query: 1   MAGAKEIRTKIGSVKSTQKITKAMEMVAASKMRRSQDAMESSRPYAQTIRKVIGHVA-NA 59
           M   K+++ +I SV+ST+KIT AM+MVAASK+RR+Q+  E+S PYA+ + +++  +A N 
Sbjct: 1   MPNLKDLKNRIASVQSTRKITSAMKMVAASKLRRAQEQAEASGPYAERMGRMLSSLAANV 60

Query: 60  SLEYRHPYLEERE-AKRVGY-IIISTDRGLCGGLNINLFKKAITDMQTWKEKGAQIELAI 117
                 P L     A +V   ++IS+DRGLCG  N ++ ++A   +   + +G  +++  
Sbjct: 61  QDSGNGPKLMTGTGADKVHLLVVISSDRGLCGAFNGSIVREAKRQITRLQGEGKTVKVLT 120

Query: 118 IGSKA--------TAFFNNSGAKVAAQVSGLGDSPSLEDLIGSVGVMLKKYDKGELDRLY 169
           +G K          +    S   V  +  G  D+    D++ +   +L  +D GE D   
Sbjct: 121 VGRKGRDQLKRDFASLIVESYEDVGRRRLGFSDA----DMVATK--VLAMFDAGEFDVCS 174

Query: 170 LVFNQFVNTMVQKPKIDQLLPLPKSDSEDMQRDHMWD-YIYEPEPKPLLDALLLRFIESQ 228
           +VFN+F + + Q   + QL+P           D +   Y +EP+ + +L  LL R +  Q
Sbjct: 175 VVFNKFKSAISQIVTVQQLIPFAVPGEAVAATDEVKPLYEFEPDEEQILAELLPRNLSIQ 234

Query: 229 VYQGVVENLACEQAARMVAMKAATDNASNLIDDLQLVYNKARQAAITQELSEIVGGAAAV 288
           +Y+ ++E+ A EQ ARM AM  AT NA ++I+ L + YN+ RQA IT+EL EI+ GA A+
Sbjct: 235 IYRALLESAASEQGARMTAMDNATRNAGDMINKLTITYNRTRQAYITKELIEIISGAEAL 294