Pairwise Alignments

Query, 467 a.a., ATP synthase subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 431 a.a., Type III secretion cytoplasmic ATP synthase (EC 3.6.3.14, YscN,SpaL,MxiB,HrcN,EscN) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  144 bits (362), Expect = 7e-39
 Identities = 102/328 (31%), Positives = 163/328 (49%), Gaps = 17/328 (5%)

Query: 56  VMGSSDGLRRGMTVQNTGAPISVPVGTKTLGRIMNVLGDAID----ERGDIGAEEVYSIH 111
           ++G++ GL R + +  TG  +S  VG   LG +++  G  ++    E   I  E V  + 
Sbjct: 63  LIGNAQGLSRDVVLYPTGRALSAWVGYSVLGAVLDPTGKIVERFTPEVAPISEERVIDV- 121

Query: 112 RPAPSYEEQSSATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQH 171
              PSY  +    E L TGV+ ID +     G ++G+F  AG GKT+ M  LI       
Sbjct: 122 -APPSYASRVGVREPLITGVRAIDGLLTCGVGQRMGIFASAGCGKTMLMHMLIEQT---E 177

Query: 172 SGLSVFAGVGERTREGNDFYHEMQEAGVVNVEQPELSKVAMVYGQMNEPPGNRLRVALTG 231
           + + V   +GER RE  +F   ++ +        +  K  +V+   + P  +R   A   
Sbjct: 178 ADVFVIGLIGERGREVTEFVDMLRASH-------KKEKCVLVFATSDFPSVDRCNAAQLA 230

Query: 232 LTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERIT 291
            T+AE FRD+G+ V+LFID++ RY  A  +V+   G  P+  GY  ++ + +  L ER  
Sbjct: 231 TTVAEYFRDQGKRVVLFIDSMTRYARALRDVALASGERPARRGYPASVFDNLPRLLERPG 290

Query: 292 STKKGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRQ 351
           +T +GSIT+   V + +++  DP      + LD  + L+R +A  G YPAID L S SR 
Sbjct: 291 ATSEGSITAFYTVLLESEEEADPMADEIRSILDGHLYLSRKLAGQGHYPAIDVLKSVSRV 350

Query: 352 LDPLVVGQEHYDVARGVQATLQRYKELK 379
               V    H + A  V+  + R +EL+
Sbjct: 351 FGQ-VTTPTHAEQASAVRKLMTRLEELQ 377