Pairwise Alignments

Query, 467 a.a., ATP synthase subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., type III secretion system ATPase SctN from Erwinia amylovora T8

 Score =  149 bits (376), Expect = 2e-40
 Identities = 118/399 (29%), Positives = 187/399 (46%), Gaps = 39/399 (9%)

Query: 43  VQQQLGGGVIRAIV-----------MGSSDGLRRGMTVQNTGAPISVPVGTKTLGRIMNV 91
           +Q+  GG V+  IV           +G+ DG+ +G T+     P S+ V  + LG +++ 
Sbjct: 56  IQRSDGGSVLSEIVGFSPEKILLSALGALDGISQGATIVPLYLPHSICVSEQLLGSVLDG 115

Query: 92  LGDAIDERGDIGAEE------VYSIHRPAPSYEEQSSATELLETGVKVIDLICPFAKGGK 145
            G A++  G     E         +   AP   E+   T  L TG++ ID +     G +
Sbjct: 116 FGRALEPGGHSAFAEPGTQVRAVPVLNDAPPPTERPRITTPLPTGLRAIDGLLTIGNGQR 175

Query: 146 IGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFY-HEMQEAGVVNVEQ 204
           +G+F GAG GKT  + EL  N         VF  +GER RE  +F  HE+ +        
Sbjct: 176 VGIFAGAGCGKTTLLAELARNTPCD---AIVFGLIGERGRELREFLDHELDD-------- 224

Query: 205 PEL-SKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVS 263
            EL S+  ++    +     R R A T   +AE FR EG+ VLL +D++ R+  A  E+ 
Sbjct: 225 -ELRSRTVLLCATSDRSSMERARAAFTATAIAEAFRAEGKSVLLIVDSLTRFARAQREIG 283

Query: 264 ALLGRMPSAVGYQPTLAEEMGVLQERITSTKKGSITSVQAVYVPADDLTDPSPATTFAHL 323
             LG  P   G  P++   +  L ER   T++G+IT++ +V +  D + DP      + +
Sbjct: 284 LALGEPPGRGGLPPSVYTLLPRLVERAGQTQQGAITALYSVLIEQDSMNDPVADEVRSLI 343

Query: 324 DATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDVARGVQATLQRYKELKDIIA 383
           D  +VL+R +A    YPAID L S SR +   VV   H   A  +++ +  Y++++ +I 
Sbjct: 344 DGHIVLSRRLAERNHYPAIDVLASLSRTMSN-VVEPGHMMQAGRLRSLMAAYQQVEMLIR 402

Query: 384 I----LGMDELSEADKQVVARARKIERFLTQPYHVAEVF 418
           +     G D L++A    V     I RFL Q     + F
Sbjct: 403 LGEYQPGNDSLTDA---AVNANDIINRFLRQSMRAPDPF 438