Pairwise Alignments

Query, 467 a.a., ATP synthase subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 430 a.a., type III secretion system ATPase SctN from Escherichia coli ECRC101

 Score =  156 bits (394), Expect = 1e-42
 Identities = 127/431 (29%), Positives = 200/431 (46%), Gaps = 29/431 (6%)

Query: 9   IIGAVVDVEFPQSEVPSVYDALNVVDSKERLVLEVQQQLGGGVIRAIVMGSSDGLRRGMT 68
           I G++++ E     V  V +      + ER+          G     ++GSS GL R   
Sbjct: 16  INGSLIEAELDDVSVGEVCEIYASRQANERIARAQVVGFRNGKTLLNLIGSSVGLTRTAV 75

Query: 69  VQNTGAPISVPVGTKTLGRIMNVLGDAI-----DERGDIGAEEVYSIHRPAPSYEEQSSA 123
           ++ TG  +++ +    LG ++N  G  +     D  GD G   +  I    PSY+E+   
Sbjct: 76  LKPTGEQLTIQISDAFLGSVLNASGQIMERFVPDTPGDRG--NLRLIDELPPSYQERRVI 133

Query: 124 TELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGER 183
              LET ++VID +     G ++G+F  AG GKTV M  L+NN     + + V   +GER
Sbjct: 134 NTPLETRIRVIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNT---EADVFVIGLIGER 190

Query: 184 TREGNDFYHEMQEAGVVNVEQPELSKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGR 243
            RE  +    ++++  VN      +K  +VY   +    +R   AL   T+AE FRD G+
Sbjct: 191 GREVTECAESLKKS--VNA-----AKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGK 243

Query: 244 DVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKKGSITSVQA 303
            V+LFID++ RY  A  ++    G  P+  GY  ++ + +  L ER   T KGSIT    
Sbjct: 244 RVVLFIDSMTRYARALRDMKLAAGEPPARRGYPASVFDSLPRLLERPGPTLKGSITEFYT 303

Query: 304 VYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYD 363
           V +  +D +DP      + LD  + L+R +A  G YPAID L S SR     V  ++H D
Sbjct: 304 VLLEGEDESDPLGDEIRSILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQ-VTDEKHRD 362

Query: 364 VARGVQATLQRYKELKDIIAILGMDELSEADKQVVARAR-KIERFLTQPYHVAEVFTGDP 422
            A  V+  L   ++L+  I +        A+      AR K+  +L Q  +         
Sbjct: 363 NAARVRKNLTTLEDLQVFIDLGEYRAGQNAENDFAMNARPKLTNWLKQSVNEK------- 415

Query: 423 GVYVPLKETLR 433
              +P+ ETL+
Sbjct: 416 ---MPMSETLK 423