Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., Bicyclomycin resistance protein from Xanthobacter sp. DMC5

 Score =  129 bits (325), Expect = 1e-34
 Identities = 90/375 (24%), Positives = 170/375 (45%), Gaps = 9/375 (2%)

Query: 16  MLGFIATDMYLPAFKMMETAFATGPEQIALSLTVFLVGMALGQLLWGLASDKFGHRNTLI 75
           MLG ++  +Y PA   +   F T    + L+LTVF  G A+ QL+ G  SD +G R   +
Sbjct: 31  MLGPVSLSLYTPALPTLVEVFGTSIATVKLTLTVFFFGFAVSQLICGPLSDAYGRRPVAL 90

Query: 76  AGLLVFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAMVIKRYPSSVSQQLFATI 135
               ++   +     + T+  L+  R +Q IG  A   + +A+V  +Y    S ++   I
Sbjct: 91  GFFGIYLSGAVVAMLAPTIGWLVAGRILQGIGAAAGIALSRALVRDQYTGQASARVMNLI 150

Query: 136 MPLVALSPALAPQLGVLLADYFGWHSIFLTLTLMGIVLVVSTGL---QTNEIAEPKTT-- 190
             ++A+ PA++P +G  L   FGWHS+F+ +T  G+ L+    L   +TN   +P+    
Sbjct: 151 GTILAIGPAISPTIGGFLLGAFGWHSVFVAMTCFGLALMTLLLLRVPETNRTPDPRLAAP 210

Query: 191 -SIAQDIKGLLKSKTYLGNVMMFACASAAFFAYLTGMPEIMA-QLGYQARDIGLSFIPQT 248
            ++A   + LL  + ++   +    A    +     +P ++  ++G      G++ + QT
Sbjct: 211 RAVAASYRRLLSDRGFMRAALTAGSALGGIYTLAAALPFVLIDRVGLSPTQFGVAMMMQT 270

Query: 249 IAFMVGGYLGKKAVQKY-GDELVLKQLIALFTLSAAMIFVASQWTLSSIWPILAPFCLIA 307
            AFM G  + +  + ++   +L+L  L+ + T + AM        LS++  ++ P    A
Sbjct: 271 GAFMFGTLIARPLLNRFKAQQLILPGLLLVLTGAIAMAVGPHVVALSTL-SVMLPISFWA 329

Query: 308 VANGAMYPIVVNRALSSAKQSPATAAGLQNSLQISVSSLSSALVAAMASQAQPVTGIAIV 367
                + P     AL+        A+ L   LQI    + +++ A + S    +T +   
Sbjct: 330 CGCALLLPGCTTNALARFGSIAGAASALTGFLQIGSGFIGTSISALLPSPLLAMTILVPA 389

Query: 368 LCTGGLWLGYVLSNR 382
           +    L +   L+ R
Sbjct: 390 MAVMALTIHLALAPR 404