Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., major facilitator transporter from Pseudomonas simiae WCS417

 Score =  119 bits (299), Expect = 1e-31
 Identities = 86/354 (24%), Positives = 160/354 (45%), Gaps = 8/354 (2%)

Query: 8   LVYLSALSMLGFIATDMYLPAFKMMETAFATGPEQIALSLTVFLVGMALGQLLWGLASDK 67
           L  L AL+ LG ++T + +P    +E A A       ++L+ F+    LGQLL+G  SD+
Sbjct: 12  LFLLVALTALGEVSTQLIIPGLGAIEQALAAPAGSSLMALSAFVAAFGLGQLLFGPLSDR 71

Query: 68  FGHRNTLIAGLLVFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAMVIKRYPSSV 127
            G R  LI GL+++ LA+  +     +   +  R +Q +G CA  V+ + +V   + +  
Sbjct: 72  IGRRPVLIGGLVLYGLATLSMLLVDDIEHFIAARVLQGLGACAALVLARTVVRDVWKAEA 131

Query: 128 SQQLFATIMPLVALSPALAPQLGVLLADYFGWHS-IFLTLTLMGIVLVVSTGL--QTNEI 184
              L  T++ ++  +  +AP +G LL  + GW + I L L +  +VL+V      ++N  
Sbjct: 132 GPALALTMIGML-YAIVVAPMVGGLLIKWLGWRAPIMLALAIGSVVLLVVLLFFRESNHY 190

Query: 185 AEPKT---TSIAQDIKGLLKSKTYLGNVMMFACASAAFFAYLTGMPEIMAQ-LGYQARDI 240
            +PK     S+      LL+ + Y    +  AC   A FA + G   +    LG+ + + 
Sbjct: 191 LDPKAGHWRSLGGQYLDLLRGRQYRAFAVALACTYGAMFAVIAGSSAVFINLLGFSSLEY 250

Query: 241 GLSFIPQTIAFMVGGYLGKKAVQKYGDELVLKQLIALFTLSAAMIFVASQWTLSSIWPIL 300
           G++F       +VG    ++ + + G + ++   +A+         V       S+  + 
Sbjct: 251 GINFGLIVSMLIVGSTYTRRNIMRLGPQRIVTMGVAMVAAGGVSAVVIYALFGLSVLGLD 310

Query: 301 APFCLIAVANGAMYPIVVNRALSSAKQSPATAAGLQNSLQISVSSLSSALVAAM 354
            P  L+ +  G + P  V   +         AAGL    Q+  ++ S  L++ +
Sbjct: 311 IPIALVTLGGGLVLPGSVTGGVMPNAHRAGLAAGLMGFAQMFGATCSGVLLSLL 364