Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 403 a.a., MFS transporter from Pseudomonas simiae WCS417

 Score =  132 bits (331), Expect = 2e-35
 Identities = 97/350 (27%), Positives = 167/350 (47%), Gaps = 8/350 (2%)

Query: 6   FQLVYLSALSMLGFIATDMYLPAFKMMETAFATGPEQIALSLTVFLVGMALGQLLWGLAS 65
           F L+ L+AL  L  +  DM+LPA   M   F T   Q+ L+LT++ +G A+  L+ G  +
Sbjct: 10  FWLMLLTALIALPRVTLDMHLPALPAMADYFHTSDSQLQLTLTLYALGSAISLLVSGPLT 69

Query: 66  DKFGHRNTLIAGLLVFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAMVIKRYPS 125
           D+FG R  L+ GL ++ LA+A  A +  +  L++ R  QA+G C   VI + MV   +  
Sbjct: 70  DRFGRRPVLLVGLFLYVLATAACALADNLAVLIIARLFQALGGCCTTVIGRVMVRDYFDR 129

Query: 126 SVSQQLFATIMPLVALSPALAPQLGVLLADYFGWHSIFLTLTLMGIVL--VVSTGL---Q 180
               +L   I   +A+SP  AP LG L+  +  W  +F+ L  +G VL  VV   L   +
Sbjct: 130 DEQARLLGLISMAMAISPMAAPVLGSLMLPFINWRGLFVLLGGIGAVLCGVVYRRLPETR 189

Query: 181 TNEIAEPKTTSIAQDIKGLLKSKTYLGNVMMFACASAAFFAYLTGMPEIMAQLGY--QAR 238
             E+A      + +    LL+ + +L   +   C  + +F +++    ++ Q G+   A 
Sbjct: 190 PPEVAAAPPQGLLRLYGQLLRDRYFLRYALAIGCVYSTYFPFISESSALL-QRGFHLSAT 248

Query: 239 DIGLSFIPQTIAFMVGGYLGKKAVQKYGDELVLKQLIALFTLSAAMIFVASQWTLSSIWP 298
              L F      +M+G  L ++ V+++  + ++   I L  L +  + +A+         
Sbjct: 249 AYALVFAATISGYMLGANLFRRLVRRFDPDRLIAVGIGLNLLGSVTLALATTALPGEWLA 308

Query: 299 ILAPFCLIAVANGAMYPIVVNRALSSAKQSPATAAGLQNSLQISVSSLSS 348
           I+ P  LI V+ G   P      L        TA+GL    Q+ ++++SS
Sbjct: 309 IVLPMVLIMVSVGMTIPACQLSVLQPYGAIAGTASGLFFFTQMLLTAVSS 358