Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  123 bits (308), Expect = 1e-32
 Identities = 98/364 (26%), Positives = 168/364 (46%), Gaps = 16/364 (4%)

Query: 2   KVSFFQLVYLSALSMLGFIATDMYLPAFKMMETAFATGPEQIALSLTVFLVGMALGQLLW 61
           ++S    + L AL  L  +A DMYLPA   +   F      + ++LT +  G A+GQLL 
Sbjct: 13  QMSLLLYIVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLLH 72

Query: 62  GLASDKFGHRNTLIAGLLVFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAMVIK 121
           G  +D FG R  ++ G+ +F +A+   A ++ +  L  +R  Q     A AV+ QA+V  
Sbjct: 73  GPLADSFGRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRD 132

Query: 122 RYPSSVSQQLFATIMPLVALSPALAPQLGVLLADYFGWHSIFLTLTLMGIVLVVSTGLQT 181
            +      +  + +  +V L+P +AP +G  LA +FGW SIF  L L   +++     + 
Sbjct: 133 MFDREDFARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKI 192

Query: 182 NEIAEPKT------TSIAQDIKGLLKSKTYLGNVMMFACASAAFFAYLTGMPEIMAQL-G 234
            E   P+        S  ++   L K+   +G +   A + A  FA+LT    +   + G
Sbjct: 193 PETLSPENRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIYG 252

Query: 235 YQARDIGLSFIPQTIAFMVGGYLGKKAVQKYGDELVLKQLIALFTLSAAMIFVASQWTLS 294
                 G  F    +A +    +  + V+K G   +L+  + L  ++   +FV+  W L 
Sbjct: 253 VSPDGFGYLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAGIGLFVS--WVLD 310

Query: 295 -SIWPILAPFCLIAVANGAMYPIVVNR---ALSSAKQSPATAAGLQNSLQISVSSLSSAL 350
             +W  + PF ++ V  G +  I  N     LS   +   TA+ L  +L+    S+  A+
Sbjct: 311 WGLWGTV-PFVVLFV--GTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGAV 367

Query: 351 VAAM 354
           VAA+
Sbjct: 368 VAAL 371