Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., Multidrug resistance transporter, Bcr/CflA family from Pseudomonas putida KT2440

 Score =  126 bits (316), Expect = 1e-33
 Identities = 95/373 (25%), Positives = 170/373 (45%), Gaps = 7/373 (1%)

Query: 11  LSALSMLGFIATDMYLPAFKMMETAFATGPEQIALSLTVFLVGMALGQLLWGLASDKFGH 70
           L  L +LG    D+ LP+F  +   F    +QIA S++ F VG+A+ Q++ G  SD  G 
Sbjct: 17  LILLCLLGVFPLDVILPSFPALSDEFRVDTKQIAYSVSFFAVGVAMAQIVIGPLSDGIGR 76

Query: 71  RNTLIAGLLVFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAMVIKRYPSSVSQQ 130
           +  L+AGL V  + + G  FS+     +  R +QA+G C   V+ QA+V   Y  +    
Sbjct: 77  KRLLLAGLSVSIVGALGCVFSTHYETFMAFRLVQALG-CGSLVLGQALVQDLYSGTQRNA 135

Query: 131 LFATIMPLVALSPALAPQLGVLLADYFGWHSIFLTLTLM-GIVLVVSTGLQTNEIAEPKT 189
           +   +     L  +L+P  G  L   FGW + F    ++  IV ++S  L  +  A    
Sbjct: 136 MRILLTSASGLFISLSPLAGAFLQQSFGWEASFTVFVIIAAIVSLLSCVLLHDTPASHDR 195

Query: 190 TSIAQDIKGLLKSKTYLGNVMMFACASAAFFAYLTGMP-EIMAQLGYQARDIGLSFIPQT 248
                  + +L+   YL + M+ + A A  F+++   P  +M +L   A    L FI   
Sbjct: 196 APSMSSYRVMLRDTDYLAHSMLSSLAFACHFSFIVIAPLLLMGRLELTAYQFSLVFIGYG 255

Query: 249 IAFMVGGYLGKKAVQKYGDELVLKQLIALFTLSAAMIFVASQWTLS-SIWPILAPFCLIA 307
           +A++VGG        +   +  +K  + L + +A +  +  +W    S+   L P  +  
Sbjct: 256 LAYIVGGMAAAYLNSRVSPQTQIKAGLLLIS-TAGITLLMWEWVAGLSVLGALLPMIVCT 314

Query: 308 VANGAMYPIVVNRALSSAKQSPATAAGLQNSLQISVSSLSSALVAAMASQAQPVTGIAIV 367
                + P    +AL+   +    AA L  +L  + + L+S++VA + S+     G+ ++
Sbjct: 315 TGTTLVRPAATTQALARYPRQAGAAASLNTTLLFAGAGLTSSVVAGLESELP--AGLGVL 372

Query: 368 LCTGGLWLGYVLS 380
                L  G++L+
Sbjct: 373 FMVASLCGGWLLA 385