Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 398 a.a., Bicyclomycin resistance protein from Pseudomonas lactucae CFBP13502

 Score =  107 bits (268), Expect = 5e-28
 Identities = 90/387 (23%), Positives = 172/387 (44%), Gaps = 12/387 (3%)

Query: 1   MKVSFFQLVYLSALSMLGFIATDMYLPAFKMMETAFATGPEQIALSLTVFLVGMALGQLL 60
           MK     +  LS+L+  G  + D YLP+F  +    +T   Q+  +++ FL G+ LG L 
Sbjct: 1   MKTQARLIALLSSLTAFGPFSIDTYLPSFPQIAEDLSTSTAQVQHTISAFLAGLCLGMLC 60

Query: 61  WGLASDKFGHRNTLIAGLLVFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAMVI 120
           +G  SD++G R  L+  L ++ +A+ G  F+ +V QL+  RF+QA+G     V+ +A+  
Sbjct: 61  YGPLSDRYGRRPLLLGSLALYVVATLGCLFAGSVEQLIAWRFVQALGGAGALVLARAVAR 120

Query: 121 KRYPSSVSQQLFATIMPLVALSPALAPQLGVLLADYFGWHSIFLTLTLMG--IVLVVSTG 178
                  + ++ + +  L  ++  +AP +G  L    GW +IF TL ++    +L+V+  
Sbjct: 121 DMVGLVEAAKVLSWMHVLTMMATLVAPMIGTWLVLIQGWRTIFATLFILSSLCLLLVALT 180

Query: 179 LQTNEIAEPKTTSIAQDIKGLLKSKTYLGNVMMFACASAAF---FAYLTGMPEI-MAQLG 234
           L+ +   + +  S+       L        V +  C +  F   FA++T  P + +   G
Sbjct: 181 LKESLPVQQRGASVQAAFAAYLAIARQPMAVALILCMALGFGGMFAFITASPFVYVVYFG 240

Query: 235 YQARDIGLSFIPQTIAFMVGGYLGKKAVQKYGDELVLKQLIALFTLSA-AMIFVASQWTL 293
              R     F    +  ++  ++  + V ++G + +L   + L + +  AM+ V      
Sbjct: 241 VSPRVFSALFALNILGIILVTFINARWVGRFGPQRMLGVGVVLASAAGLAMMLVG----- 295

Query: 294 SSIWPILAPFCLIAVANGAMYPIVVNRALSSAKQSPATAAGLQNSLQISVSSLSSALVAA 353
            + W  LA      V    +  ++    ++S        AG   +L ISV   + AL + 
Sbjct: 296 YTGWGGLASIVCCMVLYMGVTGLIGANCMASLMMLFPRQAGASVALGISVQFATGALASL 355

Query: 354 MASQAQPVTGIAIVLCTGGLWLGYVLS 380
             S     +   + L  G   LG +++
Sbjct: 356 WGSHLADGSAWPMCLVVGCCGLGALVA 382