Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., Putative transport protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  297 bits (761), Expect = 3e-85
 Identities = 168/378 (44%), Positives = 245/378 (64%), Gaps = 8/378 (2%)

Query: 8   LVYLSALSMLGFIATDMYLPAFKMMETAFATGPEQIALSLTVFLVGMALGQLLWGLASDK 67
           LV+L+ LS+LGF+ATDMYLPAF  ++    T    ++ SL++FL G A+ QLLWG  SD+
Sbjct: 8   LVWLAGLSVLGFLATDMYLPAFAAIQADLQTPAAAVSASLSLFLAGFAVAQLLWGPLSDR 67

Query: 68  FGHRNTLIAGLLVFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAMVIKRYPSSV 127
           +G +  L+ GL +F L S G+ +  +   LL LRF+QA+GVCA  VIWQA+V   YPS  
Sbjct: 68  YGRKPILLLGLSIFALGSLGMLWVESAAALLTLRFVQAVGVCAATVIWQALVTDYYPSQK 127

Query: 128 SQQLFATIMPLVALSPALAPQLGVLLADYFGWHSIFLTLTLMGIVLVVSTGLQTNEIAEP 187
             ++FATIMPLV LSPALAP LG  +  +F W +IF TL ++ ++L++   L+     + 
Sbjct: 128 INRIFATIMPLVGLSPALAPLLGSWILTHFSWQAIFATLFVITLLLML-PALRLKPSGKA 186

Query: 188 KTTSIAQD---IKGLLKSKTYLGNVMMFACASAAFFAYLTGMPEIMAQLGYQARDIGLSF 244
           +T    QD      LL+SKTY GNV+++A  SA+FFA+LTG P I++ +GY    IGLS+
Sbjct: 187 RTE--GQDKLTFATLLRSKTYRGNVLIYAACSASFFAWLTGSPFILSAMGYSPAVIGLSY 244

Query: 245 IPQTIAFMVGGYLGKKAVQKYGDELVLKQLIALFTLSAAMIFVASQWTLSSIWPILAPFC 304
           +PQTIAF++GGY  + A+QK+    +L  L+ L+ LS    + A     +S+  IL PFC
Sbjct: 245 VPQTIAFLIGGYGCRAALQKWQGYQLLPWLLGLYALSVIATWGAGLLNNASLVEILIPFC 304

Query: 305 LIAVANGAMYPIVVNRALSSAKQSPATAAGLQNSLQISVSSLSSALVAAMASQAQPVTGI 364
           ++A+ANGA+YPIVV +AL    Q+   AA LQN+LQ+ +  L+S +V+ + S    +T  
Sbjct: 305 VMAIANGAIYPIVVAQALRPFPQATGRAAALQNTLQLGLCFLASLVVSWLIS-TPLLTTT 363

Query: 365 AIVLCTGGL-WLGYVLSN 381
           +++L T  L  LGY + +
Sbjct: 364 SVMLSTVVLAALGYKMQS 381