Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., Bcr/CflA family multidrug efflux MFS transporter from Erwinia tracheiphila SCR3

 Score =  129 bits (325), Expect = 1e-34
 Identities = 93/384 (24%), Positives = 185/384 (48%), Gaps = 24/384 (6%)

Query: 1   MKVSFFQLVYLSALSMLGFIATDMYLPAFKMMETAFATGPEQIALSLTVFLVGMALGQLL 60
           M  S   +V L  L+ML  ++ DMYLPA   +   F      + ++L ++++G ALGQL+
Sbjct: 1   MNSSLGLVVILGLLAMLMPLSIDMYLPALPEIAREFGVTAGSVQMTLNIYILGFALGQLV 60

Query: 61  WGLASDKFGHRNTLIAGLLVFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAMVI 120
           +G  +D FG +  +  G L+F++A+A  A + T+ QL+++R +  +   A +V+  A++ 
Sbjct: 61  YGPLADSFGRKPLISLGTLIFSVAAAACAMAQTIDQLIVMRLLHGLSAAAGSVVSSALMR 120

Query: 121 KRYPSSVSQQLFATIMPLVALSPALAPQLGVLLADYFGWHSIFLTLTLMGIVLVVSTGLQ 180
             Y      ++ + +M +  ++P LAP +G  L   + WH+IF TL+++ +V  +    Q
Sbjct: 121 DCYSKEEFSRMMSFMMMVTTIAPLLAPIIGGWLLQIWSWHAIFWTLSMVAVVTTIMVATQ 180

Query: 181 TNEIAEPK--------TTSIAQDIKGLLKSKTYLGNVMMFACASAAFFAYLTGMPEIMAQ 232
             E             TT I  +   L++ +     ++    + A  F++L   P +  +
Sbjct: 181 IRETLPADKRQKFNLWTTLI--NFLYLVRHRQAFSYMLASGLSFAGMFSFLNAGPFVYIE 238

Query: 233 LGY-QARDIGLSFIPQTIAFMVGGYLGKKAVQKYGDELVLKQLIALFTLSAAMIFVASQW 291
           L +   +D G  F    +   +   +  ++V+++G  ++ +  +++    A  + V S  
Sbjct: 239 LNHISPQDFGYYFALNVVFLFLMTLVNSRSVRRFGPVIMFRFGLSVQFAMALWLVVVSAL 298

Query: 292 TLSSIWPILAPF-----CLIAVANGAMYPIVVNRALSSAKQSPATAAGLQNSLQISVSSL 346
            L  + P++        C+  V++ AM  I     L        TA+ L  +L+  V +L
Sbjct: 299 NLGFL-PLVFGVAMYIGCVAMVSSNAMAVI-----LEEFPHMAGTASSLAGALRFGVGAL 352

Query: 347 SSALVAAMA-SQAQPVTGIAIVLC 369
           + AL++    + A P+ G +I +C
Sbjct: 353 TGALLSTFTFTDAWPMVG-SIFIC 375