Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., multidrug effflux MFS transporter from Dickeya dianthicola ME23

 Score =  140 bits (353), Expect = 7e-38
 Identities = 114/396 (28%), Positives = 181/396 (45%), Gaps = 15/396 (3%)

Query: 2   KVSFFQLVY---LSALSMLGFIATDMYLPAFKMMETAFATGPEQIALSLTVFLVGMALGQ 58
           K+S  QL Y   L +L+ LG +  D+YLPA   M  A A       LSLT  L+G+  GQ
Sbjct: 4   KLSRSQLEYALILGSLAALGPLCIDLYLPALPQMTGALAASTAVTQLSLTAGLLGLGAGQ 63

Query: 59  LLWGLASDKFGHRNTLIAGLLVFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAM 118
           L++G  SDK G R  L+  L +  L S   A +  + QL++ R +Q I     AV+ +A+
Sbjct: 64  LIFGPLSDKLGRRRPLLLSLTMLLLTSVWCALAQDIGQLIVARLLQGIAGAGGAVLSRAI 123

Query: 119 VIKRYPSSVSQQLFATIMPLVALSPALAPQLGVLLADYFGWHSIFLTLTLMGIVLVVSTG 178
               Y      + F+ +M +  L+P L+P LG +L     W  IF+ L ++  +L+  + 
Sbjct: 124 ARDLYVGHALTRFFSLLMLINGLAPILSPVLGGVLLGVTDWRGIFVLLAVIACLLLTMSV 183

Query: 179 LQTNEI--AEPKTT----SIAQDIKGLLKSKTYLGNVMMFACASAAFFAYLTGMPEIMAQ 232
           L+ NE   AE +      S+   +  LL+ +T++G  +      A  FAY+   P ++ +
Sbjct: 184 LRLNETLPAERRIAGGVGSMLSSLGSLLRERTFMGLCLAQGLCGAGMFAYIGASPFVLQE 243

Query: 233 L-GYQARDIGLSFIPQTIAFMVGGYLGKKAVQKYGDELVLKQLIALFTLSAAMIFVASQW 291
           + G   +   L F    I  +  G L     Q++G++ VL   + +  +SA  +  A   
Sbjct: 244 VYGLSPQAFSLCFAANGIGLIAAGQLASHFSQRFGEQRVLLTGLIIAVISALALTAAGLL 303

Query: 292 TLSSIWPILAPFCLIAVANGAMYPIVVNRALSSAKQSPATAAGLQNSLQISVSSLSSALV 351
               I  ++  F  I     AM  IV   A S A QS    AG  ++L      L  AL 
Sbjct: 304 HAPLIGILIPLFFAI-----AMIGIVGPCASSLAMQSQGNKAGSASALLGLNMFLFGALS 358

Query: 352 AAMASQAQPVTGIAIVLCTGGLWLGYVLSNRTLREQ 387
             +   A   + +++ L   G +L   L+ R L  Q
Sbjct: 359 VPLTGLAGSTSVLSMALVILGCYLLAALAYRMLSSQ 394