Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 417 a.a., multidrug effflux MFS transporter from Dickeya dadantii 3937

 Score =  124 bits (310), Expect = 7e-33
 Identities = 101/404 (25%), Positives = 187/404 (46%), Gaps = 20/404 (4%)

Query: 3   VSFFQLVYLSALSMLGFIATDMYLPAFKMMETAFATGPEQIALSLTVFLVGMALGQLLWG 62
           +++  ++ L+ L+ L  +A DMYLPA   +   F     ++  +L+VFLVG+ALGQ + G
Sbjct: 12  MTYSLILLLALLTALDAMAIDMYLPAMPALAMDFGASSGKVQQTLSVFLVGLALGQGICG 71

Query: 63  LASDKFGHRNTLIAGLLVFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAMVIKR 122
              D++G R  L+AGL++F   S   A SS++  L+L RF+QA+G  A  V  +A+V   
Sbjct: 72  PLLDRYGRRIPLLAGLVIFIGGSVMAALSSSIEWLMLARFLQALGASAGLVAPRAIVADL 131

Query: 123 YPSSVSQQLFATIMPLVALSPALAPQLGVLLADYFGWHSIFLTLT-LMGIVLVVSTGLQT 181
           Y  + S ++F+ +M ++ ++P LAP LG  L  +  W  +F  L  L G  L+       
Sbjct: 132 YSVAESARIFSLLMQVMMIAPILAPLLGGYLLAHGEWRLVFWVLAGLGGAGLIWGIRTIP 191

Query: 182 NEIAEPK-------TTSIAQDIKGLLKSKTYLGNVMMFACAS----AAFFAYLTGMPEIM 230
             ++E K         S    ++  ++   Y G  M +  A      + F Y++    + 
Sbjct: 192 ESLSEEKRLASRAGNLSPGNIVRAYVRQLGY-GVFMAYTLAGGVIFGSLFVYISSSSFVF 250

Query: 231 AQ-LGYQARDIGLSFIPQTIAFMVGGYLGKKAV-QKYGDELVLKQLIALFTLSAAM--IF 286
            Q  G         F    ++ ++GG +    + ++ G++ ++   I +  L+  +  + 
Sbjct: 251 TQSFGLTPAQFSYIFAANAVSLVIGGQISTTLLRRRVGEQRIMMFGIVIHILAGLVLSVL 310

Query: 287 VASQWTLSSIWPILAPFCLIAVANGAMYPIVVNRALSSAKQSPATAAGLQNSLQISVSSL 346
           + S W    +W  L        A G ++  +    ++ A +    A+ L   LQ  +++L
Sbjct: 311 ILSGWI--GLWGYLLLLATAIGALGLVFGNLTALTMAYAGRQAGVASALMGMLQYLIAAL 368

Query: 347 SSALVAAMASQAQPVTGIAIVLCTGGLWLGYVLSNRTLREQFTT 390
                A+   Q   V  + IVLC     L  ++++   +  F+T
Sbjct: 369 -VGYCASQVLQGPVVLPVVIVLCGVVAMLLCIMASHMAQAAFST 411