Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 392 a.a., MFS permease from Agrobacterium fabrum C58

 Score =  115 bits (288), Expect = 2e-30
 Identities = 91/361 (25%), Positives = 154/361 (42%), Gaps = 9/361 (2%)

Query: 14  LSMLGFIATDMYLPAFKMMETAFATGPEQIALSLTVFLVGMALGQLLWGLASDKFGHRNT 73
           L+ L  I+  +Y PA   +   FAT    I LSL+++  G AL QLL G ASD FG R  
Sbjct: 13  LTALAPISMAIYTPAMPELTRVFATNESAIKLSLSLYFAGFALAQLLAGPASDAFGRRRA 72

Query: 74  LIAGLLVFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAMVIKRYPSSVSQQLFA 133
            +  L VF        F+ T+  LLL R IQ IG      + +A+V  ++  + +  +  
Sbjct: 73  SLVFLSVFLGGGLLAIFAPTIEVLLLARLIQGIGASVGMTVARAIVRDQFTGAEASSIMN 132

Query: 134 TIMPLVALSPALAPQLGVLLADYFGWHSIFLTLTLMGIVLVVSTGLQTNEIAEP-----K 188
            I  ++A+ PAL P +G L    FGW S+F  +  +G   + S  +   E   P     +
Sbjct: 133 LIGIMLAVGPALGPTIGGLSLAAFGWKSVFFLMAGLGAAAIFSVVIFLRETTVPDKSLIR 192

Query: 189 TTSIAQDIKGLLKSKTYLGNVMMFACASAAFFAYLTGMPEIMAQ-LGYQARDIGLSFIPQ 247
              +      LL    +L   ++   +  A +A  T +  I+   +G      G+  + Q
Sbjct: 193 PRRLLSAYGNLLTEPRFLLAALVLGGSIGALYAQATMLTFILINTVGMTPTAFGIGMLMQ 252

Query: 248 TIAFMVGGYLGKKAVQKYGDELVLKQLIALFTLSAAMIFVASQWTLSSIWPILAPFCLIA 307
           T A+  G    +    + GD   +   +        +I ++      S + I+ P  +  
Sbjct: 253 TGAYFFGSIALRYIAPRLGDRRSVMLGLCFSGTGGLLILLSVFLIPPSFFSIMGPVAVAT 312

Query: 308 VANGAMYPIVVNRALSSAKQSPATAAGLQNSLQISVSSLSSALVAAMASQAQPVTGIAIV 367
           V    + P +V  AL+       +A+ +   +Q+  S  +    A++     P+TG  IV
Sbjct: 313 VGIALLTPSMVTAALAPFPHIAGSASAMMGFIQMG-SGFAGGTAASLI--GSPLTGFGIV 369

Query: 368 L 368
           +
Sbjct: 370 I 370