Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 399 a.a., MFS permease from Agrobacterium fabrum C58

 Score =  108 bits (271), Expect = 2e-28
 Identities = 85/372 (22%), Positives = 165/372 (44%), Gaps = 9/372 (2%)

Query: 8   LVYLSALSMLGFIATDMYLPAFKMMETAFATGPEQIALSLTVFLVGMALGQLLWGLASDK 67
           ++ L  ++ +  +  +++LP+   M   F      +  +++ +L   AL QL+ G  SD 
Sbjct: 15  IITLVVIAGVAALCMNLFLPSLSAMALYFEIDYAVMQFAVSGYLAATALLQLVIGPLSDL 74

Query: 68  FGHRNTLIAGLLVFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAMVIKRYPSSV 127
           FG R  ++A + +   A+     +S +   ++ R  QA  V +  V+ +A+V    P   
Sbjct: 75  FGRRPVMLASITIMIAATLVCMLASDITVFMIGRVAQA-AVVSGFVLARAIVRDMVPMEQ 133

Query: 128 SQQLFATIMPLVALSPALAPQLGVLLADYFGWHSIFLTLTLMGIVLVVSTGLQTNEIAEP 187
           +  +   +   +++ P + P +G LL D+ GW S F  L L+G  ++V       E  + 
Sbjct: 134 AASMIGYVTMGMSVVPMVGPTVGGLLNDFSGWQSSFALLALLGAGILVLAWFDLGETNQS 193

Query: 188 KTTSIAQDIKG---LLKSKTYLGNVMMFACASAAFFAYLTGMPEIMAQL-GYQARDIGLS 243
           K+ S +Q       LL+S  + G  +    +S  FF++L G P + + L G     +GL 
Sbjct: 194 KSASFSQQFHAWPELLRSPLFWGYALTSTFSSGMFFSFLGGAPFVGSVLYGLTPAMLGLQ 253

Query: 244 FIPQTIAFMVGGYLGKKAVQKYGDE--LVLKQLIALFTLSAAMIFVASQWTLSSIWPILA 301
           F      +M+G ++  +   + G    ++   +IA+  +  A+  +       S +    
Sbjct: 254 FFFMASGYMLGNFVSGRYASQIGISRMMLSGNVIAIAGIVTAIALITG--GAESAYAFFV 311

Query: 302 PFCLIAVANGAMYPIVVNRALSSAKQSPATAAGLQNSLQISVSSLSSALVAAMASQAQPV 361
           P  LI V NG   P      +S       +A+GL  ++ I   +  S L +++ S+    
Sbjct: 312 PLALIGVGNGVTLPSANAGMVSVQPHLAGSASGLGGAMTIGGGAALSVLASSVLSKEDGT 371

Query: 362 TGIAIVLCTGGL 373
             + +V+   GL
Sbjct: 372 WPLLLVILATGL 383