Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., Chloramphenicol resistance protein CraA from Acinetobacter radioresistens SK82

 Score =  101 bits (252), Expect = 3e-26
 Identities = 84/381 (22%), Positives = 162/381 (42%), Gaps = 17/381 (4%)

Query: 19  FIATDMYLPAFKMMETAFATGPEQIALSLTVFLVGMALGQLLWGLASDKFGHRNTLIAGL 78
           +I  D+  PA   +   F         S++ +L+G A    L G  SD+ G +  L++G+
Sbjct: 28  YIGNDLVQPAMLAITRDFGVSSSWAPSSMSFYLLGGACVAWLLGPLSDRLGRKKVLLSGV 87

Query: 79  LVFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAMVIKRYPSSVSQQLFATIMPL 138
           L F +    +  +  +   L LRF+Q IG+     +  A + + +    + ++ A +  +
Sbjct: 88  LFFVVCCLLILLTQRIETFLALRFLQGIGLTVITAVGYAAIQETFEERDAIKVMALMANI 147

Query: 139 VALSPALAPQLGVLLADYFGWHSIFLTLTLMGIV----LVVSTGLQTNEIAEPKTTSIAQ 194
             L+P L P LG  L D+  WH  F+ + L+  +    L          I +   + I  
Sbjct: 148 SLLAPLLGPILGAFLIDHVSWHWGFIGIALLAFLSWFGLKAKMPEYKQSIPKQPISYILY 207

Query: 195 DIKGLLKSKTYLGNVMMFACASAAFFAYLTGMPEIMA-QLGYQARDIGLSFIPQTIAFMV 253
           D K + + K +LG  +     S     ++   P ++  +LG  +   G++  P     ++
Sbjct: 208 DFKKVYQDKHFLGLTLALPMVSMPLMLWIALSPVMLVEELGLSSLQYGMAQFP-----VL 262

Query: 254 GG-YLGKKAVQKYGDELVLKQLI----ALFTLSAAMIFVASQWTLSSIWPILAPFCLIAV 308
           GG  LG   + K  D+LVL + +     +  L   ++F+   W    +W ++    LI+ 
Sbjct: 263 GGLILGNIVLIKVIDKLVLGKTVLIGLPIMLLGTFILFLGVIWPAYFLWSLIIGMTLISF 322

Query: 309 ANGAMYPIVVNRALSSAKQSPATAAGLQNSLQISVSSLSSALVAAMASQAQPVTGIAIVL 368
             G  + ++   AL S++ S  T A   + L +    +   LV  +  Q   +      L
Sbjct: 323 GEGLSFSVLYRFALMSSQVSKGTVAAAVSMLLMFSFFIIIELVRMLYEQFHLLGYSLACL 382

Query: 369 CTGGLWLGY--VLSNRTLREQ 387
               LW  +  +L N+ ++++
Sbjct: 383 VLIALWFTFPRMLLNKVMQQR 403