Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., Bicyclomycin resistance protein from Acinetobacter radioresistens SK82

 Score =  143 bits (360), Expect = 1e-38
 Identities = 91/347 (26%), Positives = 168/347 (48%), Gaps = 17/347 (4%)

Query: 8   LVYLSALSMLGFIATDMYLPAFKMMETAFATGPEQIALSLTVFLVGMALGQLLWGLASDK 67
           L+ L++L+ LG ++ DMYLPA   M   F    + +A +L  + +G+A+GQL++G  SD+
Sbjct: 17  LMLLASLTALGPLSIDMYLPALPGMAEEFGVSTQMVANTLPAYFLGLAVGQLIYGPVSDR 76

Query: 68  FGHRNTLIAGLLVFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAMVIKRYPSSV 127
            G +  L  GLL++ +AS   AF+++ W L+  R +QA+G C   VI +A +  R     
Sbjct: 77  IGRKKPLYFGLLLYVVASLLCAFATSEWSLIFSRILQALGGCVGVVIARAAIRDRLDVQA 136

Query: 128 SQQLFATIMPLVALSPALAPQLGVLLADYFGWHSIFLTLTLMGIVLVVSTGLQTNEIAEP 187
           S Q FA++M ++ ++P +AP LG  L  YF WH+IF+ L L+GI+  +   L   E  +P
Sbjct: 137 SAQAFASMMIVMGIAPVMAPALGAWLLIYFEWHAIFVALALIGIICCICVALFFKETLQP 196

Query: 188 K------TTSIAQDIKGLLKSKTYLGNVMMFACASAAFFAYLTGMPEIMA-QLGYQARDI 240
           +         +    K + + K++ G +++     A  F Y++    ++  Q     +  
Sbjct: 197 ERRLKLSARQVLSLYKTIFQDKSFRGPMVIGCFTGAVLFCYISSAASVLIDQYHLSQQHF 256

Query: 241 GLSFIPQTIAFMVGGYLGKKAVQKYGDELVLK-----QLIALFTLSAAMIFVASQWTLSS 295
             +F    +   +   + K+  +       LK     QL+ +F L  A ++  +   +  
Sbjct: 257 AYAFGFNAVGITLFSSINKRLARNMSIIQRLKLGGILQLMGVFILLGAGLYDDTALAI-- 314

Query: 296 IWPILAPFCLIAVANGAMYPIVVNRALSSAKQSPATAAGLQNSLQIS 342
              +++   L     G   P  +  A++       TA+ +  S+Q +
Sbjct: 315 ---VMSGLFLAVSGIGFTGPNAMALAMAEQGSRAGTASAIMGSMQFA 358