Pairwise Alignments

Query, 302 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., DNA-binding transcriptional activator of the allD operon from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  136 bits (343), Expect = 5e-37
 Identities = 77/286 (26%), Positives = 145/286 (50%), Gaps = 2/286 (0%)

Query: 2   MFSKSSLEMLDAVARLGSFTAAAEVLHKVPSAISYSVRQIESELGVVLFRRLPRKVELTP 61
           MF   +L    +VA  GSF+ AAE L K  + ISY ++ +E   GV LF R  R V LT 
Sbjct: 1   MFDPETLRTFISVAETGSFSKAAERLCKTTATISYRIKLLEENTGVGLFFRTTRSVSLTA 60

Query: 62  AGELFMLEARQLLRQMEEIRAQTKRAAHGWRKTLKVTLDNVV-KLDKMKPMVEAFYQTFD 120
           AG   + +A+  L  ++ +  + ++   G  + + + ++N++     +  ++      + 
Sbjct: 61  AGSHLLSQAKDWLAWLDSMPDELRQVNDGVERQVNIVVNNLLYSPQAVASLLSWLNARYP 120

Query: 121 FAELQINMEVFNGSWEAIAQGRADIVIGATAAVPVGGDFEVRDMGILDWAFVMSPNHPCV 180
           F +   + +++ G W+++      + IG T   P+   F +  +G + W FVMS +HP  
Sbjct: 121 FTQFHFSRQIYMGVWDSLLYEGFSLAIGVTGTEPLANTFMLDPLGSVQWRFVMSADHPLA 180

Query: 181 REQN-LSEGFISQFLAICLDDTSSVLPKRHTEHYPKQRRLLLPNWYSAIESLKSGLGVGY 239
                L+E  + +F AI ++D++  L KR     P Q+ +++P+  + I +  +G+G+G+
Sbjct: 181 HVSGPLTEAQLRRFPAINIEDSARTLTKRVAWRLPGQKEIIVPDMETKIAAHLAGVGIGF 240

Query: 240 MPRHMAQPLLASGQLVEKVLPDEKLLSHCCLVWRKDDNHKLIEWMV 285
           +P+ + Q L+   +LV   +P  +  S   L W K    K +E +V
Sbjct: 241 VPQPLCQTLIDKNELVSCTIPTMRPPSPLSLAWHKFGGGKAVEDIV 286