Pairwise Alignments

Query, 302 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score =  132 bits (333), Expect = 7e-36
 Identities = 86/278 (30%), Positives = 139/278 (50%), Gaps = 3/278 (1%)

Query: 7   SLEMLDAVARLGSFTAAAEVLHKVPSAISYSVRQIESELGVVLFRRLPRKVELTPAGELF 66
           +L ++DA+ R GSF AAA+ L +VPSA+SY+++++E EL VVLF R   + + T  G + 
Sbjct: 11  ALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHRTKFTNVGRML 70

Query: 67  MLEARQLLRQMEEIRAQTKRAAHGWRKTLKVTLDNVVKLDKMKPMVEAFYQTFDFAELQI 126
           +   R LL   +++    +  A GW   L +  + +V      P+++      +  +L I
Sbjct: 71  LERGRVLLEAADKLTTDAEALARGWETHLTIVTEALVPTPAFFPLIDKLAAKAN-TQLAI 129

Query: 127 NMEVFNGSWEAIAQGRADIVIGATAAVPVGGDFEVRDMGILDWAFVMSPNHPCVRE-QNL 185
             EV  G+WE + QGRADIVI          +   R +  L   +V +P+HP  +E + L
Sbjct: 130 ITEVLAGAWERLEQGRADIVIAPDMHFRSSSEINSRKLYTLMNVYVAAPDHPIHQEPEPL 189

Query: 186 SEGFISQFLAICLDDTSSVLPKRHTEHYPKQRRLLLPNWYSAIESLKSGLGVGYMPRHMA 245
           SE    ++  I + DT+   P    +   KQ RL +       ++L +GLGV  MP  M 
Sbjct: 190 SEVTRVKYRGIAVADTARERPVLTVQLLDKQPRLTVSTIEDKRQALLAGLGVATMPYPMV 249

Query: 246 QPLLASGQLVEKVLPDEKLLSHCCLVWRKDDNHKLIEW 283
           +  +A G+L   V P+        + WR+D   +   W
Sbjct: 250 EKDIAEGRL-RVVSPESTSEIDIIMAWRRDSMGEAKSW 286