Pairwise Alignments

Query, 387 a.a., acetyl-CoA C-acyltransferase FadA from Vibrio cholerae E7946 ATCC 55056

Subject, 398 a.a., 3-ketoacyl-CoA thiolase [fadN-fadA-fadE operon] (EC 2.3.1.16) from Variovorax sp. SCN45

 Score =  308 bits (788), Expect = 2e-88
 Identities = 185/397 (46%), Positives = 240/397 (60%), Gaps = 24/397 (6%)

Query: 6   IVDCLRTPMGRSKGGAFRHQRAEDLSAHLMKGILARNPQVNPKEIEDIYWGCVQQTLEQG 65
           IV   RTP+G+S  G FR+ R +DL A  ++  LA  P ++PK IEDI  GC     +QG
Sbjct: 9   IVSATRTPIGKSHRGYFRNYRPDDLLATTLRAALAAVPSLDPKAIEDIICGCAIPESQQG 68

Query: 66  FNVARNAALLAGLPIEIGAVTVNRLCGSSMQALHDAARAIMVGDAEICLVGGVEHMGHVP 125
            NVAR  A+LAGLP  +G +TVNR C S + A+  AA  I VG+A++ +  GVE M  VP
Sbjct: 69  LNVARIGAVLAGLPTSVGGITVNRFCASGLSAVQMAADRIRVGEADVMIAAGVESMSMVP 128

Query: 126 MTHGVDFHPGLSKNVAKAAG------MMGLTAEMLGKLHGISRQQQDEFAARSHARAHAA 179
           M   +   P LS ++ +  G       MGLTAE + +   +SR+ QDEFA  SH +A AA
Sbjct: 129 M---MGNSPSLSPSIFEREGDVGIAYGMGLTAEKVAQQWKVSREAQDEFALASHQKALAA 185

Query: 180 TLEGRFKNEILPTE----------GHAADGTLFTLDYDEVIRPETTVAGLAELRPVFDPA 229
              G+F +EI P E          G +   T  T++ DE  RP+T++ GLA+LR VF  A
Sbjct: 186 QKAGKFADEITPIEVTDRTPNLETGESIAKTR-TVNLDEGARPDTSLEGLAKLRTVF-AA 243

Query: 230 NGTVTAGTSSALSDGASAMLVMSEQKAKALGLTIRARIKAMAVAGCDPSIMGYGPVPATH 289
            GTVTAG SS  SDGA A+++ SE+  K  GLT  AR  + A  G  P IMG GP+ A  
Sbjct: 244 RGTVTAGNSSQTSDGAGALILASEKAVKQYGLTPLARFVSFASKGVPPHIMGIGPIEAIP 303

Query: 290 KALQRAGLTMQDMDVVELNEAFAAQSLPCAKDLGLLEMMDDKVNLNGGAIALGHPLGCSG 349
            AL+ AGL  +D+D  ELNEAFAAQSL     LGL      KVN  GGAIALGHPLG +G
Sbjct: 304 AALRYAGLKHEDIDWFELNEAFAAQSLAVINTLGL---DPSKVNPMGGAIALGHPLGATG 360

Query: 350 TRISTTLINLMEAKDAKYGLATMCIGLGQGIATIFER 386
              S T+++ +  ++ KYG+ TMC+G+GQG A IFER
Sbjct: 361 AIRSATVVHALRRENLKYGMVTMCVGMGQGAAGIFER 397