Pairwise Alignments

Query, 387 a.a., acetyl-CoA C-acyltransferase FadA from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., 3-ketoacyl-CoA thiolase 2 [fadN-fadA-fadE operon] (EC 2.3.1.16) from Variovorax sp. SCN45

 Score =  304 bits (778), Expect = 3e-87
 Identities = 182/384 (47%), Positives = 236/384 (61%), Gaps = 13/384 (3%)

Query: 5   VIVDCLRTPMGRSKGGAFRHQRAEDLSAHLMKGILARNPQVNPKEIEDIYWGCVQQTLEQ 64
           VI    R+P   +K GA    R + L+A ++KG+L R   ++P  +EDI  GC      Q
Sbjct: 4   VISAYARSPFHFAKKGALADVRPDTLTAGVVKGLLQRT-DLDPALLEDIILGCAYPEASQ 62

Query: 65  GFNVARNAALLAGLPIEIGAVTVNRLCGSSMQALHDAARAIMVGDAEICLVGGVEHMGHV 124
           G N+AR   LLAGLP E+G +TVNR CGSSMQA+H AA  I  G  +  L  GVE M  V
Sbjct: 63  GNNLARIVGLLAGLPHEVGGMTVNRFCGSSMQAVHIAAAQIEAGMGDAFLCVGVESMTAV 122

Query: 125 PMTHGVDFHPG--LSKNVAKAAGMMGLTAEMLGKLHGISRQQQDEFAARSHARAHAATLE 182
           P   G +F P   L  N   A   MG TAE + +   +SR  Q+ FA  SH +A AA  E
Sbjct: 123 PQG-GFNFSPSPELLANT-DAYISMGETAENVARRWNVSRADQEAFAVESHRKAAAARAE 180

Query: 183 GRFKNEILPTEGHAADGTLFTLDYDEVIRPETTVAGLAELRPVFDPANGTVTAGTSSALS 242
           GR   EI+P    + D     +D D  IRP T+   LA L+P F P +G VTAGTSS L+
Sbjct: 181 GRLAGEIVPVRLASGD----IVDADGCIRPSTSAEALANLKPAFRP-DGVVTAGTSSPLT 235

Query: 243 DGASAMLVMSEQKAKALGLTIRARIKAMAVAGCDPSIMGYGPVPATHKALQRAGLTMQDM 302
           DGA+ +LV S+  A   GL   ARI++ A  G DP+IMG GP+PAT KAL RAGL++ D+
Sbjct: 236 DGAAVVLVTSDAFAAQHGLQALARIRSFATVGVDPAIMGIGPIPATRKALARAGLSVADL 295

Query: 303 DVVELNEAFAAQSLPCAKDLGLLEMMDDKVNLNGGAIALGHPLGCSGTRISTTLINLMEA 362
           DV+E+NEAF++Q+L C +DLGL      K+NL+GG +A+GHPLG +G RI+    +L+  
Sbjct: 296 DVIEINEAFSSQALACIRDLGL---DPAKINLDGGGLAIGHPLGATGARITGKAASLLAR 352

Query: 363 KDAKYGLATMCIGLGQGIATIFER 386
           +  +Y LAT CIG GQGIATI ER
Sbjct: 353 EKGRYALATQCIGGGQGIATILER 376