Pairwise Alignments

Query, 387 a.a., acetyl-CoA C-acyltransferase FadA from Vibrio cholerae E7946 ATCC 55056

Subject, 378 a.a., 3-ketoacyl-CoA thiolase 2 [fadN-fadA-fadE operon] (EC 2.3.1.16) from Sphingobium sp. HT1-2

 Score =  312 bits (799), Expect = 1e-89
 Identities = 186/388 (47%), Positives = 242/388 (62%), Gaps = 16/388 (4%)

Query: 1   MNTVVIVDCLRTPMGRSKGGAFRHQRAEDLSAHLMKGILARNPQVNPKEIEDIYWGCVQQ 60
           M  VV+    R+P   +  GA    R +DL+A +++G++ +   V  ++IEDI  GC   
Sbjct: 1   MRNVVVAGYARSPFHLAGKGALARVRPDDLAAQVIRGLIQQTG-VKAEDIEDIVLGCAFP 59

Query: 61  TLEQGFNVARNAALLAGLPIEIGAVTVNRLCGSSMQALHDAARAIMVGDAEICLVGGVEH 120
             EQGFN+AR   LLA LP+ +G +TVNR CGSSM ++H AA  I +G  E  +  GVE 
Sbjct: 60  EGEQGFNIARLIGLLADLPLSVGGMTVNRFCGSSMSSVHIAAGQIQLGAGEAFICAGVES 119

Query: 121 MGHVPMTHGVDFHPGLSKNVAKAAGM---MGLTAEMLGKLHGISRQQQDEFAARSHARAH 177
           M  VPM   + F+P  +  +AK +     MG TAE +   + I+R QQ+ FA  S  +A 
Sbjct: 120 MSRVPM---MGFNPLPNPELAKKSAAYMGMGDTAENIATKYQITRAQQEAFAVASQDKAA 176

Query: 178 AATLEGRFKNEILPTEGHAADGTLFTLDYDEVIRPETTVAGLAELRPVFDPANGTVTAGT 237
           AA   G+ + EI+P    A       +D D   R  TT   LA L+P F   +GTVTAGT
Sbjct: 177 AAIAAGKLEAEIVPITTKAG-----VVDKDGTPRAGTTTETLAGLKPAFSQ-DGTVTAGT 230

Query: 238 SSALSDGASAMLVMSEQKAKALGLTIRARIKAMAVAGCDPSIMGYGPVPATHKALQRAGL 297
           SS L+DGASA+LV SE  A+A GL I ARIK++AV+GC P IMG GPV A+ KALQRAGL
Sbjct: 231 SSPLTDGASAILVTSEDYARAHGLPILARIKSVAVSGCQPEIMGIGPVEASRKALQRAGL 290

Query: 298 TMQDMDVVELNEAFAAQSLPCAKDLGLLEMMDDKVNLNGGAIALGHPLGCSGTRISTTLI 357
           ++  +DVVELNEAFA+QSL C  DLGL +    KVNL+GGAIA+GHPLG +G RI     
Sbjct: 291 SVDQLDVVELNEAFASQSLACISDLGLDQ---SKVNLDGGAIAIGHPLGATGARIVGKAA 347

Query: 358 NLMEAKDAKYGLATMCIGLGQGIATIFE 385
            L++ +   Y LAT CIG GQGIAT+ E
Sbjct: 348 ALLKREGGSYALATQCIGGGQGIATVLE 375