Pairwise Alignments

Query, 723 a.a., fatty acid oxidation complex subunit alpha FadB from Vibrio cholerae E7946 ATCC 55056

Subject, 715 a.a., multifunctional fatty acid oxidation complex subunit alpha from Pseudomonas simiae WCS417

 Score =  793 bits (2049), Expect = 0.0
 Identities = 414/716 (57%), Positives = 515/716 (71%), Gaps = 3/716 (0%)

Query: 1   MIYQAKTLQVKQLANGIAELSFCAPA-SVNKLDLHTLESLDKALDALAADSSVKGLLLSS 59
           MIY+ K + VK L +GI EL F     SVNK +  TL  L +A+D + AD+SVKG+++SS
Sbjct: 1   MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASVKGVIVSS 60

Query: 60  DKEAFIVGADITEFLGLFAKPEAELDEWLQFANRIFNKLEDLPFPTLSALKGHTLGGGCE 119
            K+ FIVGADITEF+  F  P+AEL      AN+IF+  EDL  PT++A+ G  LGGG E
Sbjct: 61  GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE 120

Query: 120 CVLATDFRIGDATTSIGLPETKLGIMPGFGGTVRLPRLIGADSAMEIITQGKACRAEEAL 179
             LA DFR+  AT  IGLPE KLGI PGFGGTVRLPRLIGAD+A+E I  GK  +AE+AL
Sbjct: 121 MCLAADFRVMSATAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENKAEDAL 180

Query: 180 KVGLLDAIVDSDKLIDSAITTLTQAIEEKLDWQKRRQQKTSALTLSKLEAMMSFTMAKGM 239
           KVG +DA+V  DKL ++A+  +  AI  + D++ +RQ K   L L+ +E MMSF  AKG 
Sbjct: 181 KVGAVDAVVAPDKLAEAALNLIKGAISGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGF 240

Query: 240 VAQVAGKHYPAPMTSVVTIEEAARLPRDAALDIERKHFIKLAKSTEAQALVGIFLNDQYI 299
           VA  AG +YPAP+ ++ TI++AA   RD AL++E   F+KLAK++ AQ+L+G+FLNDQ +
Sbjct: 241 VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL 300

Query: 300 KGLAKQSAKAASQDTQHAAVLGAGIMGGGIAYQSALKGVPVLMKDIAPHSLELGMTEAAK 359
           K  AK   + A +D + AAVLGAGIMGGGIAYQSA KG P+LMKDI  H +E G+ EAAK
Sbjct: 301 KKKAKAYDEIA-KDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAK 359

Query: 360 LLNKQLERGKIDGFKMAGILASITPSLHYAGIDQADVIVEAVVENPKVKAAVLSEVEGLV 419
           LL  ++++G++   KMA +L  I P+L Y      D++VEAVVENPKVK AVL+EVE  V
Sbjct: 360 LLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEAQV 419

Query: 420 DTETILTSNTSTIPINLLAKSLKRPQNFCGMHFFNPVHRMPLVEIIRGEHTSEDTINRVV 479
             +TIL SNTSTI I+LLAK+LKRP+NF GMHFFNPVH MPLVE+IRGE +SE  +   V
Sbjct: 420 KDDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTV 479

Query: 480 AYAAKMGKSPIVVNDCPGFFVNRVLFPYFAGFSLLMRDGANFTEIDKVMERQFGWPMGPA 539
           AYA KMGK+PIVVNDCPGF VNRVLFPYF GF+ L+  G +F  IDKVME+ FGWPMGPA
Sbjct: 480 AYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEK-FGWPMGPA 538

Query: 540 YLLDVVGIDTAHHAQAVMAEGFPTRMAKSGREAIDALYEAKKFGQKNGSGFYQYTVDKKG 599
           YL+DVVGIDT HH + VMAEGFP RM    R AIDALYEAK+ GQKNG GFY Y  DKKG
Sbjct: 539 YLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYEADKKG 598

Query: 600 KPKKAFSDDVLAILAPVCGAPQSFDPQTLIERTMIPMINEVVLCLEEGIIASAQEADMAL 659
           K KK     V  +LAPV    +    + +I   MI +  E V CLE+GI+ +A EADM L
Sbjct: 599 KQKKVADPSVHEVLAPVIYEQREVSDEDIINWMMIALCLETVRCLEDGIVETAAEADMGL 658

Query: 660 VYGLGFPPFRGGVFRYLDTIGIANYVAMAEKYADLGALYQVPQLLKNMAQQGTSFY 715
           VYG+GFPPFRGG  RY+D+IG+A +VA+A+KYADLG LY     L+ MA+ G SF+
Sbjct: 659 VYGIGFPPFRGGALRYIDSIGVAEFVALADKYADLGPLYHPTAKLREMAKNGQSFF 714