Pairwise Alignments

Query, 723 a.a., fatty acid oxidation complex subunit alpha FadB from Vibrio cholerae E7946 ATCC 55056

Subject, 701 a.a., 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein from Variovorax sp. OAS795

 Score =  315 bits (806), Expect = 6e-90
 Identities = 215/701 (30%), Positives = 352/701 (50%), Gaps = 35/701 (4%)

Query: 28  VNKLDLHTLESLDKALDALAADSSVKGLLLSSDKEAFIVGADITEFLGLFAKPEAELDEW 87
           VN L   T   +   L    AD +VK ++++   +AF  GADI EF      P+A     
Sbjct: 21  VNGLGFSTRIGITDGLAKANADDAVKAIVITGAGKAFSGGADIKEF----GTPKA----- 71

Query: 88  LQFAN--RIFNKLEDLPFPTLSALKGHTLGGGCECVLATDFRIGDATTSIGLPETKLGIM 145
           LQ  N   +   LE  P P ++A+    +GGG E  L   +R+    TSI LPE KLG++
Sbjct: 72  LQEPNLLSVILALEASPKPIVAAIHSVCMGGGLELALGCHYRVAAPGTSIALPEVKLGLI 131

Query: 146 PGFGGTVRLPRLIGADSAMEIITQGKACRAEEALKVGLLDAIVDSDKLIDSAITTLTQAI 205
           PG GGT RLPR++G ++A+ +I  G+  ++E       L A +   KL D    +     
Sbjct: 132 PGAGGTQRLPRVLGVETALNMIVSGEPVKSE-------LLAGLPGQKLFDRLAASPESVF 184

Query: 206 EEKLDWQKRRQQKTS-ALTLSKL------EAMMSFTMAKGMVAQVAGKHYPAPMTSVVTI 258
           EE + + K    K   AL L +       +    F  A+ MV  ++ K+YPAP+  V  +
Sbjct: 185 EEAVAFAKSVGAKGGDALPLVRNLPCKHPQGDAYFQFARNMVGGMS-KNYPAPLQCVDAV 243

Query: 259 EEAARLPRDAALDIERKHFIKLAKSTEAQALVGIFLNDQYIKGLAKQSAKAASQDTQHAA 318
           + A ++  DA +  ER+ F  L  + E+ AL  +F+ ++    +   +     +  +   
Sbjct: 244 QAATQMKFDAGMAEERRIFTSLMFTPESLALRHLFMAERAASKIPDVADDTPKRQVKSVG 303

Query: 319 VLGAGIMGGGIAYQSALKGVPVLMKDIAPHSLELGMTEAAKLLNKQLERGKIDGFKMAGI 378
           V+GAG MGGGI+      G+PV + ++   +L+ G+    K    Q+++GK+   K    
Sbjct: 304 VIGAGTMGGGISMNFLNAGIPVKILEMKQEALDRGIATIRKNYESQVKKGKLKQDKYEQR 363

Query: 379 LASITPSLHYAGIDQADVIVEAVVENPKVKAAVLSEVEGLVDTETILTSNTSTIPINLLA 438
           +A ++ +L Y  +  AD+I+EAV E   VK  V  E++ +     IL SNTST+ ++ +A
Sbjct: 364 MALLSTTLSYDDLKDADLIIEAVFEELGVKEKVFKELDRVAKKGAILASNTSTLDVDKIA 423

Query: 439 KSLKRPQNFCGMHFFNPVHRMPLVEIIRGEHTSEDTINRVVAYAAKMGKSPIVVNDCPGF 498
              +RPQ+  GMHFF+P + M L+E++RG+ T++D +  V+    K+ K+ +V   C GF
Sbjct: 424 AFTQRPQDVVGMHFFSPANVMKLLEVVRGKETAKDVLATVMDIGKKIKKTAVVSGVCDGF 483

Query: 499 FVNRVLFPYFAGFSLLMRDGANFTEIDKVMERQFGWPMGPAYLLDVVGIDTAHHAQAVMA 558
             NR++  Y      L+ +GA   ++DK +E+ FG+ MGP  + D+ G D     +   A
Sbjct: 484 IGNRMIEQYSRQAGFLLDEGATPQQVDKAVEK-FGFAMGPFRMGDLAGNDIGWAIRKRRA 542

Query: 559 EGFPTRMAKSGREAIDALYEAKKFGQKNGSGFYQYTVDKKGKPKKAFSDDVLAILAPVCG 618
              P    K  R A D L E  +FGQK G+G+Y Y   K+        + ++       G
Sbjct: 543 VEHPD--MKYSRTA-DKLCELGRFGQKTGAGWYDYQAGKRDAIPSELVNKMIEDHRKELG 599

Query: 619 -APQSFDPQTLIERTMIPMINEVVLCLEEGIIASAQEADMALVYGLGFPPFRGGVFRYLD 677
             P+    + +++R +  ++NE    LE+GI +   + DM  + G GFP +RGG   Y  
Sbjct: 600 ITPRKISDEEIVQRLVYALVNEGAHILEDGIASKPGDIDMVYLTGYGFPIWRGGPMHYAS 659

Query: 678 TIGIANYVAMAEKYA----DLGALYQVPQLLKNMAQQGTSF 714
            +G+ N     +++A    D    +Q   L++ +  +G SF
Sbjct: 660 QVGLYNVAETMKRFAKNPRDDAEFWQPAPLIQKLVAEGKSF 700