Pairwise Alignments

Query, 849 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 831 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  250 bits (639), Expect = 2e-70
 Identities = 146/455 (32%), Positives = 250/455 (54%), Gaps = 12/455 (2%)

Query: 390 WTASMPKPGKIYETSLLVQAFIEMTNSLKASFKALRSQLVYDSLTQLLSREGLVEHCHQI 449
           W +   + G   + +  +  F ++T + + + + L  +  +D LT+L +R   ++   Q 
Sbjct: 120 WLSITSQRGADGKVARRIAVFRDVTEARETA-EQLWQRSNFDPLTELPNRNLFLDRLLQA 178

Query: 450 PQLNG------GLILIGIDKFRDINDSLGHHQADQLLVAIAQRLKVTFPEPALIARIGGD 503
             L G       ++ IG+D F++INDSLGH   D++L   A+R +    +    AR GGD
Sbjct: 179 LVLAGREGSKVAMLFIGLDGFKNINDSLGHWIGDKVLQEAARRFQNCLRQGDTAARFGGD 238

Query: 504 EFAIYLPDVNQQDDLKSVATDILKLFASPFSMPSDNIAVNVSIGIVYL--EEPNMTVWLR 561
           EF + L  V    ++++V   +L++   PF +   +I ++ SIG+     +  ++   +R
Sbjct: 239 EFTVVLSGVRATAEVEAVIRSVLEVLQEPFVVEHHHILISCSIGVCMWPGDGEDVDSLMR 298

Query: 562 NGSIALSNAK-AEHTHISFYSPEMANASRKRMLMVTQIKLALDNQEFVPFYQPIVDLNSG 620
           N + AL  AK A      F++P M   ++ R  +  ++  AL   EF   +QP+VD+ SG
Sbjct: 299 NATAALQQAKQAGRNTFRFFTPAMDARAQARSRLADELSGALSQGEFHLVFQPLVDVKSG 358

Query: 621 EVLGAEALARWISPEFGLIPPMDFIPIAEESGLINAIGEQILRQACADTVRGIAENKWPS 680
           +V  AEAL RW +   G++ P  F+P+AEE GLI  IGE +L  AC + +  + +     
Sbjct: 359 KVNAAEALLRWHNRYLGVVSPDQFVPLAEEIGLIRPIGEWLLTAACREAL--VWQGMGLG 416

Query: 681 TFHMHVNLSVNQLSHPDFIAQLHSVLDESGLQPTNLTLEITESRIVDNDPVILHNMLELK 740
             ++ VN+S  Q    D +  +   L+++ L P  LT+EITE  ++ N   IL  M  ++
Sbjct: 417 EINIAVNISPRQFQQGDIVGIIRRALEDTRLPPWLLTIEITEGLLLSNGEEILAKMEAIR 476

Query: 741 KARIHIAIDDFGTGYSSLAYLHKLPFDCLKIDREFVSQLNAYNIENSVVAAIVNMTRGFK 800
              + +++DDFGTGYSSL+YL   P D LKIDR F++ +  ++ + ++V AI+ +     
Sbjct: 477 TLGVSLSVDDFGTGYSSLSYLKSFPVDVLKIDRSFIADMGDHSDDATMVEAIIALGHSLH 536

Query: 801 VELVAEGIETQEQVDLLNQLGCPRGQGFLFSKPMA 835
           +E+VAEG+ET++Q+D +   GC   QG+ FS P++
Sbjct: 537 LEVVAEGVETKQQLDFITAQGCDVAQGYYFSPPLS 571