Pairwise Alignments

Query, 849 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 860 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Enterobacter asburiae PDN3

 Score =  240 bits (612), Expect = 3e-67
 Identities = 136/386 (35%), Positives = 211/386 (54%), Gaps = 9/386 (2%)

Query: 456 LILIGIDKFRDINDSLGHHQADQLLVAIAQRLKVTFPEPALIARIGGDEFAIYLPDVNQQ 515
           +I + +DKF+ +ND  GH   D LL  +A RLK        +AR GGDEF + L + +QQ
Sbjct: 471 MICLDLDKFKPVNDIFGHSTGDALLGEVASRLKNCVRRGDFVARQGGDEFMLLLGNTSQQ 530

Query: 516 DDLKSVATDILKLFASPFSMPSDNIAVNVSIGIVYLEEPNMTV--WLRNGSIALSNAKAE 573
           D ++ V   I++    PF++  +++A+ VS+GI      + +    LR   IAL  AK  
Sbjct: 531 DQIEEVCRRIVQELNRPFAIEGNDVAIGVSMGIALAPRDSSSANDLLRYADIALYQAKQS 590

Query: 574 -HTHISFYSPEMANASRKRMLMVTQIKLALDNQEFVPFYQPIVDLNSGEVLGAEALARWI 632
                 +Y P+M+    +R  +  ++K A+  ++    YQP  +L    +   EAL RW 
Sbjct: 591 GRNRWVYYRPDMSEKLTERRKLELELKTAIREEQLYLVYQPRYNLRYSTIDAVEALVRWQ 650

Query: 633 SPEFGLIPPMDFIPIAEESGLINAIGEQILRQACADTVRGIAENKWPSTFHMHVNLSVNQ 692
            P  G I P  FIP+AEE+GLI ++   ++R+ACA+T     ++K P    + VN+S  +
Sbjct: 651 HPARGTIMPDQFIPLAEETGLIISLSNWVIRKACAET-----KDKLPG-LSVSVNISAIE 704

Query: 693 LSHPDFIAQLHSVLDESGLQPTNLTLEITESRIVDNDPVILHNMLELKKARIHIAIDDFG 752
               D   ++  +L E+GL+P  L +E+TE+  + +    L  M  LKK  + I IDDFG
Sbjct: 705 FQASDLAERIKEILRETGLEPNRLEIEVTENVTLSDPEKTLQTMKSLKKMGVRILIDDFG 764

Query: 753 TGYSSLAYLHKLPFDCLKIDREFVSQLNAYNIENSVVAAIVNMTRGFKVELVAEGIETQE 812
           TGY+SL+YL K  FD LK+D+ F+  L       SVV  I+++ + + + + AEG+ET E
Sbjct: 765 TGYASLSYLRKFQFDGLKLDKSFIFTLGDSPQNQSVVEKIIDLGKAYSMAVTAEGVETAE 824

Query: 813 QVDLLNQLGCPRGQGFLFSKPMAYQD 838
           Q+  L +  C   QG+L  KP A  D
Sbjct: 825 QLSFLKKNKCDEVQGYLLGKPAAITD 850