Pairwise Alignments

Query, 849 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1516 a.a., Bacteriophytochrome cph2 from Alteromonas macleodii MIT1002

 Score =  254 bits (648), Expect = 4e-71
 Identities = 158/472 (33%), Positives = 258/472 (54%), Gaps = 27/472 (5%)

Query: 386  ANGDWTA---SMPKPGKIYETSLLVQA--------------FIEMTNSLKASFKALRSQL 428
            A G+W+    S+   G+ YE  L + A              F ++T S K++ K L    
Sbjct: 1025 AKGNWSGEVESVRVNGERYEMELNIDAVHDDDGKISHFVGVFSDIT-SRKSTEKELLKLA 1083

Query: 429  VYDSLTQLLSREGLVEHCHQIPQLNG---GLILIGIDKFRDINDSLGHHQADQLLVAIAQ 485
              D LT+L +R    +  HQ     G    L+ + +D F+ INDSLGH   D L+  IA+
Sbjct: 1084 NTDPLTELPNRS-FFQASHQNLVRKGVQHTLLCLDMDNFKKINDSLGHQTGDILIKQIAK 1142

Query: 486  RLKVTFPEPALIARIGGDEFAIYLPDVNQQDDLKSVATDILKLFASPFSMPSDNIAVNVS 545
            RL+    + A   R+GGDEF++ + D      +   A ++L   + PF +      +  S
Sbjct: 1143 RLQRITGKSATCYRLGGDEFSVLMEDNADIHTVTHYAQNLLDTLSRPFIINKQEFVLGAS 1202

Query: 546  IGIVYLEEPNMTV--WLRNGSIALSNAKAEHTH-ISFYSPEMANASRKRMLMVTQIKLAL 602
            IGI +  +   +    L+N   A+  AK    +   F+S EM   + +++ +   I+  +
Sbjct: 1203 IGIAFFPDDGTSPQEMLKNADTAMYFAKNNGGNSYQFFSGEMNQNAVRQLQIENLIRQGI 1262

Query: 603  DNQEFVPFYQPIVDLNSGEVLGAEALARWISPEFGLIPPMDFIPIAEESGLINAIGEQIL 662
             +  F  +YQP VD+ SG+++  EAL R+  P+ G++ P  FIP+AE++G I  IGEQ+L
Sbjct: 1263 KDDLFTVYYQPKVDIASGKLVSMEALVRFEHPQKGIVSPGQFIPLAEQTGQIIEIGEQVL 1322

Query: 663  RQACADTVRGIAENKWPSTFHMHVNLSVNQLSHPDFIAQLHSVLDESGLQPTNLTLEITE 722
            R+ACADT R + +  +     + VN+S  Q   P+   +++ +L + GL P +L  EITE
Sbjct: 1323 RKACADTKRWVNQGLFSG--RVAVNISAKQFELPNLDDRINKILSDIGLSPLHLECEITE 1380

Query: 723  SRIVDNDPVILHNMLELKKARIHIAIDDFGTGYSSLAYLHKLPFDCLKIDREFVSQLNAY 782
              ++++    L  M  L++  IH+A+DDFGTGYSSLAYL + P + LKID+ F+  +   
Sbjct: 1381 GTLMESPENGLQMMTRLRERGIHLALDDFGTGYSSLAYLKRFPLNTLKIDKAFIDDIAKS 1440

Query: 783  NIENSVVAAIVNMTRGFKVELVAEGIETQEQVDLLNQLGCPRGQGFLFSKPM 834
            N++  + AAI+N+     +++VAEG+E + Q+D+L +  C   QGFL+S+P+
Sbjct: 1441 NVDRHMAAAIINIAHNLGLKVVAEGVEEEAQLDILRRYDCEMLQGFLYSRPL 1492