Pairwise Alignments

Query, 354 a.a., nitrogen regulation protein NR(II) from Vibrio cholerae E7946 ATCC 55056

Subject, 418 a.a., Sensory histidine kinase/phosphatase NtrB from Xanthobacter sp. DMC5

 Score =  170 bits (430), Expect = 7e-47
 Identities = 113/329 (34%), Positives = 178/329 (54%), Gaps = 12/329 (3%)

Query: 31  ANPAAEQLFSQSAKRLMHQSLNHLVQHSSLDLQLLTQPLQSGQSITDSDVTLVI--DSKP 88
           AN AAE  F  SA  L  + L   V   +  L L+ Q  Q G  + +  V L    +   
Sbjct: 82  ANVAAEAFFEVSAPLLRRRPLTEFVPFGTPLLGLIDQVRQRGAPVNEYRVDLGTPRNGGE 141

Query: 89  LMLEVTVSPISWHKE-LLLLAEMRTIGQQRRLTQELNQHAQQQAAKLLVRGLAHEIKNPL 147
            ++++ V+P++   + ++++ + RTI    ++ ++L      ++   L   LAHEIKNPL
Sbjct: 142 RIVDIHVAPVNEQPDNVVVMLQERTIAD--KMDRQLTHRGAARSVSALASMLAHEIKNPL 199

Query: 148 GGLRGAAQLLERMLPDPALMEYTQIIIEQADRLRGLVDRL--LGPQRPGEKKWENLHLIL 205
            G+RGAAQLLE+   D      T++I ++ADR+  LVDR+     +RP E++  N+H +L
Sbjct: 200 SGIRGAAQLLEQSADDED-RALTRLICDEADRIVKLVDRMEVFSDERPVEREPVNIHAVL 258

Query: 206 EKVRQLVELEAGANLVFERDYDPSLPNILMDTDQIEQALLNIVSNAAQILTNQTHGVITL 265
           E VR L       ++ F  +YDPSLP +L + DQ+ Q  LN+V NAA+ + +   G I L
Sbjct: 259 EHVRTLASSGFARHIRFVEEYDPSLPPVLANRDQLIQVFLNLVKNAAEAIDSDQDGEIQL 318

Query: 266 RT--RTVHQANIHGQRHKLVASIE--IIDNGPGIPPELQDTLFYPMVSGREGGTGLGLSI 321
            T  R   +  + G   ++   +E  + DNG G+P +L   LF P V+ +  G+GLGL++
Sbjct: 319 TTAFRPGVRLMVPGASTRVSLPLEFCVRDNGKGVPEDLVPHLFDPFVTTKPTGSGLGLAL 378

Query: 322 SQNLIDQHQGKIEVQSWPGRTVFTIYLPI 350
              +I  H G +E  S P RT F + LP+
Sbjct: 379 VAKIIGDHGGIVECDSQPRRTTFRVLLPM 407