Pairwise Alignments

Query, 354 a.a., nitrogen regulation protein NR(II) from Vibrio cholerae E7946 ATCC 55056

Subject, 593 a.a., Alginate biosynthesis sensor protein KinB from Pseudomonas putida KT2440

 Score = 97.1 bits (240), Expect = 1e-24
 Identities = 92/356 (25%), Positives = 162/356 (45%), Gaps = 35/356 (9%)

Query: 9   QTIINNQVTSVLILDESLMIRYANPAAEQLFSQSAKRLMHQSLNHLVQHSSLDLQLLTQP 68
           Q ++++    +LI+D    + + NP A++    +  RL   SL   +Q   L+ QL  Q 
Sbjct: 259 QAVLDSIDDGLLIIDRQGRLEHLNPVAQRQLGWNDSRL-GSSLVEALQRPELEQQL-RQV 316

Query: 69  LQSGQ-SITDSDVTLVIDSKPLMLEVTVSPISWHKELLLLAEMRTIGQQRRLTQELNQHA 127
           L+ G       D+ + +D +  +L  +++P+S  +  +L A M        L     Q A
Sbjct: 317 LRGGSLDRPPDDLNMEVDEESRLLTYSLTPVSHPQGPILGAVMV-------LHDVTEQRA 369

Query: 128 QQQAAKLLVRGLAHEIKNPLGGLRGAAQLLERML---PDPALMEYTQIIIEQADRLRGLV 184
            ++     V   +HE++ P+ G+  A  LL   +   P+    +  + I E+  RL  L+
Sbjct: 370 FERVRSEFVLRASHELRTPVTGMHMAFGLLRERVKFPPEARENDLLETIGEEMQRLTQLI 429

Query: 185 DRLLGPQR--PGEKKWENLHLILEKV-----RQLVELEAGANLVFERDYDPSLPNILMDT 237
           + LL   R   G +K E     ++ +      +  E  A   +   ++ DP LP I  D 
Sbjct: 430 NDLLNFSRYQSGLQKLELAPCAIDDLLDHAQSRFAEQAAHKQIELIKELDPPLPRIQADV 489

Query: 238 DQIEQALLNIVSNAAQILTNQTHGVITLRTRTVHQANIHGQRHKLVASIEIIDNGPGIPP 297
            Q+++ L N++ NA +             T    +  +H +RH     I + DNG GI  
Sbjct: 490 AQLDRVLDNLLHNAIR------------HTANGGRIRLHARRHAERVIISVEDNGEGISY 537

Query: 298 ELQDTLFYPMVS--GREGGTGLGLSISQNLIDQHQGKIEVQSWPGR-TVFTIYLPI 350
             Q  +F P V    ++GG GLGL++ + ++  H G++ V S PG+ T F + LP+
Sbjct: 538 GQQARIFEPFVQVGRKKGGAGLGLALCKEIVQLHGGRMGVFSRPGQGTQFYMALPV 593