Pairwise Alignments

Query, 354 a.a., nitrogen regulation protein NR(II) from Vibrio cholerae E7946 ATCC 55056

Subject, 678 a.a., Sensor histidine kinase RcsC from Pseudomonas sp. RS175

 Score = 91.3 bits (225), Expect = 7e-23
 Identities = 101/388 (26%), Positives = 167/388 (43%), Gaps = 62/388 (15%)

Query: 10  TIINNQVTSVLILDESLMIRYANPAAEQLFSQSAKRLMHQSLNHLVQHSSLDLQLLTQPL 69
           +II++  ++++ LDE L +   N  A  L        ++Q +    +     L  L Q +
Sbjct: 291 SIIDSMPSALIALDEQLYVTQWNQEASALSGTRLDEALNQPIFLAFEPLKPYLPQLKQTV 350

Query: 70  QSGQSITDSDVTLVIDSKPLMLEVTVSPISWHKELLLLAEMRTIGQQRRLTQELNQHAQQ 129
           +         VT   D +     +T  P+       ++  +  I Q+  L + + Q  + 
Sbjct: 351 EQHTVAKIERVTWTKDDEARHYALTFYPLMGGAGRGVVIRIDDITQRLSLEEMMVQSEKM 410

Query: 130 QAAKLLVRGLAHEIKNPLGGLRGAAQLLERMLPDPALMEYTQIIIEQADRL--------- 180
            +   L  G+AHEI NPLG +    Q + R L  P L +     +EQA++L         
Sbjct: 411 LSVGGLAAGMAHEINNPLGAILHNVQNIRRRL-SPELPKN----LEQAEQLGIELQVVNR 465

Query: 181 ----RGLVDRLLGPQRPGEKKWENLHLILEKVRQLVELEAGANL---------------- 220
               R +   L G Q+ G +  + +  +L   R+     A  +L                
Sbjct: 466 YLEGRDIPQLLDGIQQAGARAAKIVTHMLSFSRRSTRQMAPCDLPALIDQAVEIAGNDFD 525

Query: 221 ----------VFERDYDPSLPNILMDTDQIEQALLNIVSNAAQIL----TNQTHGVITLR 266
                        R +DP+L  +    +++EQ LLN++ NAAQ +     N   G I LR
Sbjct: 526 LAIGFDFKGQAIIRQFDPNLGPVPGTANELEQVLLNLLKNAAQAIHQRQDNSEPGRIILR 585

Query: 267 TRTVHQANIHGQRHKLVASIEIIDNGPGIPPELQDTLFYPMVSGRE--GGTGLGLSISQN 324
           TR           +   A I++ DNG G+   ++   F P  + +E   GTGLGLS+S  
Sbjct: 586 TRL----------NPPWAEIQVEDNGIGMSENVRKRTFEPFFTTKEVGQGTGLGLSVSYF 635

Query: 325 LI-DQHQGKIEVQSWPGR-TVFTIYLPI 350
           +I + H+G++EVQS PG+ T FT+ LP+
Sbjct: 636 IITNNHKGQMEVQSAPGQGTCFTLRLPL 663