Pairwise Alignments

Query, 354 a.a., nitrogen regulation protein NR(II) from Vibrio cholerae E7946 ATCC 55056

Subject, 373 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score =  173 bits (438), Expect = 7e-48
 Identities = 121/360 (33%), Positives = 187/360 (51%), Gaps = 32/360 (8%)

Query: 10  TIINNQVTSVLILDESLMIRYANPAAEQLFSQSAKRLMHQSLNHLVQHSSLDLQLLTQPL 69
           T+++    +V+ +D   +IRYAN AAEQLF+  A  L+   +   +   S  L L+TQ  
Sbjct: 22  TVLSALGAAVVAVDRQNVIRYANGAAEQLFACGAAYLIGHPVTDFLPPDSPLLALVTQAR 81

Query: 70  QSGQSITDSDVTL----------VIDSKPLMLEVTVSPISWHKELLLLAEMRTIGQQRRL 119
               S+ +  VTL           +   P++       IS H++ + L          ++
Sbjct: 82  DGNFSVAEHGVTLDTPRTGHRTVTVQVSPIIETAGAVVISLHEQSIAL----------KI 131

Query: 120 TQELNQHAQQQAAKLLVRGLAHEIKNPLGGLRGAAQLLERMLPDPALMEYTQIIIEQADR 179
             +L      ++   +   LAHE+KNPL G+RGAAQLLE+   +   +  T++I ++ADR
Sbjct: 132 GAQLTSRNAARSVSAMAAILAHEVKNPLSGIRGAAQLLEQNAGEDDRV-LTRLICDEADR 190

Query: 180 LRGLVDRL--LGPQRPGEKKWENLHLILEKVRQLVELEAGANLVFERDYDPSLPNILMDT 237
           +  LVDR+         E+   N+H +LE VR++ E     ++    +YDPSLP +L D 
Sbjct: 191 IVALVDRMEAFSDNPSVERSAVNIHRVLEHVRRISEAGFARSVRIIENYDPSLPPVLGDR 250

Query: 238 DQIEQALLNIVSNAAQILTNQTHGVITLRTRTVHQANI-----HGQRH-KLVASIEIIDN 291
           DQ+ Q  LN+V NAA+ +  +  G I L T   H   +       +RH  LV SI+  DN
Sbjct: 251 DQLVQVFLNLVKNAAEAVPEEG-GEIVLSTGYQHGVRLALPGSETRRHLPLVVSIQ--DN 307

Query: 292 GPGIPPELQDTLFYPMVSGREGGTGLGLSISQNLIDQHQGKIEVQSWPGRTVFTIYLPIL 351
           GPGIP +L+  LF   V+ +  G+GLGL++   +I  H G IE  S P RT+F + LP++
Sbjct: 308 GPGIPEDLKPNLFDAFVTTKTSGSGLGLALVAKIIGDHGGVIEFDSVPRRTIFRVMLPMV 367